Halorussus gelatinilyticus: M0R88_11535
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Entry
M0R88_11535 CDS
T08255
Name
(GenBank) transcription elongation factor Spt5
KO
K15172
transcription elongation factor SPT5
Organism
haxz
Halorussus gelatinilyticus
Pathway
haxz03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
haxz00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
M0R88_11535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
haxz03021
]
M0R88_11535
03019 Messenger RNA biogenesis [BR:
haxz03019
]
M0R88_11535
Transcription machinery [BR:
haxz03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
M0R88_11535
RNA polymerase I system
M0R88_11535
Messenger RNA biogenesis [BR:
haxz03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
M0R88_11535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt5-NGN
KOW
Ribosomal_uL24m-like
DUF6093
KOW4_SPT5
SH3_KIN17_C
KOW2_Spt5
Motif
Other DBs
NCBI-ProteinID:
UPV99157
UniProt:
A0A8U0IE14
LinkDB
All DBs
Position
complement(2248948..2249385)
Genome browser
AA seq
145 aa
AA seq
DB search
MAMYAVKTTASQERTVADMIINREEPEIHAALAPDSLTSYVMVEADNDAVISRVLEEIPH
ARSMVPGASDISEVEHFLSPTPDVEGIAEGDIVELIAGPFKGEKAQVQRIDEGKDQVTVE
LYEATVPIPVTVRGDQIRVLDSEER
NT seq
438 nt
NT seq
+upstream
nt +downstream
nt
atggcaatgtacgcagtcaagacgaccgcgagtcaggagcgcacagtggcggacatgata
atcaaccgcgaggagccggagattcacgccgcgctcgcgcccgactcgctgacgagttac
gtgatggtcgaggccgacaacgacgccgtcatcagccgcgtcctcgaagagattccccac
gcccggagcatggtgcccggtgcgagcgatatctccgaggtcgaacacttcctctcgccg
acccccgacgtggagggcatcgccgagggcgacatcgtggaactcatcgccggaccgttc
aagggcgagaaggcgcaggtccaacgcatcgacgaaggcaaggaccaggtgacggtcgaa
ctgtacgaggcgacggttccgattccggtgacggttcgaggcgaccagattcgcgtgctg
gacagcgaggaacggtag
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