KEGG   Halorussus gelatinilyticus: M0R88_14370
Entry
M0R88_14370       CDS       T08255                                 
Name
(GenBank) ATP-dependent DNA ligase
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
haxz  Halorussus gelatinilyticus
Pathway
haxz03030  DNA replication
haxz03410  Base excision repair
haxz03420  Nucleotide excision repair
haxz03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:haxz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    M0R88_14370
   03410 Base excision repair
    M0R88_14370
   03420 Nucleotide excision repair
    M0R88_14370
   03430 Mismatch repair
    M0R88_14370
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:haxz03032]
    M0R88_14370
   03400 DNA repair and recombination proteins [BR:haxz03400]
    M0R88_14370
Enzymes [BR:haxz01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     M0R88_14370
    6.5.1.6  DNA ligase (ATP or NAD+)
     M0R88_14370
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     M0R88_14370
DNA replication proteins [BR:haxz03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    M0R88_14370
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     M0R88_14370
DNA repair and recombination proteins [BR:haxz03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     M0R88_14370
   NER (nucleotide excision repair)
    Other NER factors
     M0R88_14370
   MMR (mismatch excision repair)
    Other MMR factors
     M0R88_14370
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase
Other DBs
NCBI-ProteinID: UPV99692
UniProt: A0A8U0IFE1
LinkDB
Position
complement(2788638..2790431)
AA seq 597 aa
MQFGEFADTAAEIEELSADTDITERVTRLFAQAGDDLPVLARFVQGRVFPAWSSRTLDIG
PNYCYEAIARAAGANVSADDVEDRLAEVGDVGEVAASYDFGGQQGLGAFTGGGAGGAGGG
SGGTDANDLTVAEVAVELDALAAAEGSGSQDKKIDVLFALFNRASSAEARYLARLVLSEM
RIGVGEGTVRDATADAFEVPVEAVERALQVSNDYGEVARVARDEGESGLAAMDLELGRPV
QAMLAQAGTVADALDDWDEAAVEWKYDGARVQIHYDPDGLSWDAADDGADPTRSDATADR
EVAIFSRNMEDVTDPLPEIAEYVADRLDRPAILDGEVVATEDGDPLPFQEVLRRFRRKHD
VARAREEVELDLFAFDCLHAAGEDLLRTPLPERHDRLKSVFDAESESDAEDGSEASAVSS
LHITDDPEEIAEIEAEALDAGHEGIMLKNPDSTYSPGRRGKNWLKRKPDVESLDLVVTGA
EWGEGRRASFLGTFLLSARVEAGESFETLGKVATGITDEELEELTELLEPHVRKQEGQEV
EIAPEVVFEVGYEEIQESPTYSSGYALRFPRFLGVRDDKDPESADSLARVERLADEQ
NT seq 1794 nt   +upstreamnt  +downstreamnt
atgcaattcggggagttcgccgacaccgccgccgaaatcgaggagctgagcgccgacacc
gacatcaccgagcgggtcacgagactgttcgcgcaggccggcgacgacctccccgtgctg
gcccggttcgtgcagggccgcgtcttcccggcgtggtcctcgcggacgctcgacatcggg
ccgaactactgctacgaggccatcgcgcgggccgccggcgcgaacgtctcggccgacgac
gtggaggaccgcctcgccgaggtgggcgacgtcggcgaggtggccgcgagctacgacttc
ggcggccagcagggactgggcgcgttcaccggcggcggtgcgggcggcgcaggcggcggc
tccggcggaaccgacgcgaacgacctgaccgtcgcggaagtcgccgtggaactcgacgcg
ctcgcggccgccgaggggtcgggcagtcaggacaagaagatagacgtgctgttcgcgctg
ttcaaccgcgctagctcggcggaggctcgctatctcgcccggctcgtcctctcggagatg
cgcatcggcgtcggcgagggcaccgtccgcgacgccaccgccgacgccttcgaggtgccc
gtcgaggcggtcgagcgcgcgctccaggtctcgaacgactacggcgaggtcgctcgcgtc
gcccgcgacgagggcgagtcgggcctcgcggcgatggacctcgaactcggccgcccggtg
caggcgatgctcgcgcaggcgggaaccgtcgccgacgcgctcgacgactgggacgaggcc
gccgtcgagtggaagtacgacggcgcgcgcgtccaaattcactacgaccccgacggactg
agttgggacgccgccgacgacggcgcggacccgacccggagcgacgccactgccgaccgc
gaggtcgccatcttctcgcggaacatggaggacgtgaccgacccgctccccgaaatcgcc
gagtacgtcgctgaccgcctcgaccgaccggccatcctcgacggggaagtcgtcgccacc
gaggacggcgacccgctgccgtttcaggaagtcctgcggagattccgccggaagcacgac
gtggcacgggcccgcgaggaggtggaactcgacctgttcgcgttcgactgcctgcacgcc
gccggcgaggacctgctccggacgcccctgcccgagcgccacgaccgactgaaatcggtc
ttcgacgccgagagcgagtcagatgccgaggacgggtcggaagcgtcggcggtctcgtcg
ctccacatcacggacgaccccgaggaaatcgccgagatagaggccgaggccctcgacgcg
ggccacgagggtatcatgctcaagaaccccgattcgacgtactcgccgggccgccggggg
aagaactggctcaagcggaaacccgacgtagagtcgctcgacctcgttgtcacgggcgcg
gagtggggcgagggccgccgggcgagtttcctcgggacgttcctgctctcggcgcgcgtc
gaggcgggcgagagtttcgagacgctcgggaaggtcgccaccggcatcaccgacgaggaa
ctcgaagaactgaccgaactgctggaaccccacgttcgcaagcaggagggccaagaggtc
gaaatcgccccggaagtcgtcttcgaggtgggctacgaggagattcaggagtccccgacc
tactcgtcgggctacgccctgcgcttcccgcggttcctcggcgtgcgcgacgacaaggac
cccgagagcgcggactcgctggcgcgcgtcgagcgactggccgacgagcagtag

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