Halorussus gelatinilyticus: M0R88_15510
Help
Entry
M0R88_15510 CDS
T08255
Name
(GenBank) CDC48 family AAA ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
haxz
Halorussus gelatinilyticus
Pathway
haxz04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
haxz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
M0R88_15510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
haxz03019
]
M0R88_15510
03009 Ribosome biogenesis [BR:
haxz03009
]
M0R88_15510
04131 Membrane trafficking [BR:
haxz04131
]
M0R88_15510
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
haxz04147
]
M0R88_15510
Messenger RNA biogenesis [BR:
haxz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
M0R88_15510
Ribosome biogenesis [BR:
haxz03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
M0R88_15510
Membrane trafficking [BR:
haxz04131
]
SNARE
SNARE associated proteins
Others
M0R88_15510
Autophagy
Aggrephagy
Other aggrephagy associated proteins
M0R88_15510
Exosome [BR:
haxz04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
M0R88_15510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
AAA_5
TIP49
AAA_22
AAA_2
CDC48_2
AAA_33
NPHP3_N
nSTAND3
AAA_28
RNA_helicase
AAA_14
AAA_7
Mg_chelatase
IstB_IS21
AAA_3
AAA_18
AAA_24
ABC_tran
Sigma54_activat
NB-ARC
ATPase
TsaE
AAA_lid_PRS2_C
NACHT
Vps4_C
AAA_30
AAA_11
PhoH
Parvo_NS1
bpMoxR
SLFN-g3_helicase
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
UPV99912
UniProt:
A0A8U0IFZ9
LinkDB
All DBs
Position
complement(3024089..3026320)
Genome browser
AA seq
743 aa
AA seq
DB search
MSDIQLQVKQAYANDTGQGVARLAPTVLEELQLTPGGFVTIEGSTTTVAKVQQTDFEDWN
DETIRIDGFTRQNADVTLGDHVTVQKATLGAIRHIILAPTEEVHVPIGPNVAGLIEHQLR
NRPVSEDDLVPVDSSDQPFVQTPGETLSLIALEIKPNQTGKITEKTSITIRETPVTDQST
TDDHNIITYEEIGGLENEVERVREMIELPIAHPTVFRKLGIEAPKGVLLHGPPGTGKTLL
AKAVANETDASFHSIAGPEIISKYYGESEEELREIFASASDNPPAIIFLDELDSIAPTRN
DVTGEVERRVVAQLLPLMDGLENRGDVVVIGATNRPDAIDPALRRPGRFDREIEIGVPSA
HDREEILQIHTRGMPLADDVDLDQLAADTHGFVGADIASLAKEAAMHALRRYLPDIDLDD
EEDAEIPPALLDRMSVTTTDFDSVLSEIKPSALRDVRVELPDVTWDDVGGLRDAKQALRE
SIVWSLQSPEKFDRLGIDSVTGVLLYGPPGTGKTLLAKVVANEADANFIPVRGPEILSKW
TGESEAAIRDTFRKARESAPAVVFFDELDSLAAGRSQGLGGESSDRLVNQLLTELDGIQP
LEDVMVVGATNRPDMLDEAILRTSRFDRLVNVGAPDVEGRTQIFKVQTDDTPLASDVSFR
DLAEMTEGYVGSDIEAVAQEAAIKALREQAEPSEVALHHFSKAIADVRPTMTETVETRYE
RITDDFENGQLDDGSVSGPRGFR
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacatccaactccaagtcaagcaagcatatgcaaacgataccggacagggagtt
gcccgactggcccctaccgtgcttgaggaactacagctcacgcccggtgggttcgtgacc
atcgagggcagtactacgaccgttgcgaaggtccagcagaccgacttcgaggactggaac
gacgaaacgatccgtattgacgggtttacgagacaaaacgccgacgtcacgctcggcgat
cacgttacggtgcagaaggccactctcggggctatcaggcacatcatcttggcaccgaca
gaggaggtccacgttcccatcggcccgaatgtcgcaggtctcatcgaacaccaactccgt
aatcggcccgtcagtgaagatgacctcgttccggtcgattcctccgaccagccgttcgtc
caaacaccgggcgagacgctttcgctcatcgcactcgaaatcaagcccaaccagaccggt
aaaatcaccgagaaaacgagcatcaccattcgtgaaacaccagtgaccgaccaatccacg
acagacgaccacaacatcatcacatacgaggagatcggcgggctcgaaaacgaagtcgaa
cgcgtccgtgagatgatcgaacttccaattgcccatcccacggtgttccgaaagctgggc
atcgaggcaccaaagggtgtcctgttgcacgggccaccgggtaccggaaaaacgttactc
gcaaaggcggtcgccaacgaaaccgacgcttcattccactcgattgccggtccggaaatc
atctccaagtactacggcgaatccgaggaggaactccgcgaaatattcgcgtctgctagc
gataacccgccagccatcatcttcctcgatgaactcgattcgattgcgcccacgcgtaac
gacgtgactggcgaggtcgaacgacgcgtcgttgcccaactcctcccgttgatggacggc
ctcgaaaatcgcggtgacgtcgtcgtaatcggcgcgacgaatcgacctgacgcgattgat
cccgcacttcggcgtcccggacgattcgaccgcgaaatcgaaatcggcgtacccagcgca
cacgaccgggaggaaattcttcaaatccacacgcgtggcatgccacttgccgacgacgtt
gacctcgaccagctcgctgccgacacccacggattcgtcggcgcagacattgcatcactg
gcgaaagaggcagcgatgcacgcactccgacggtatctgccagatattgacctcgacgac
gaggaggacgcggagattccaccggcactcctcgatcgcatgagcgtgaccacgaccgat
ttcgacagcgttctcagcgagatcaagccctccgcgttacgtgacgtgcgcgtcgaactc
ccagacgtaacgtgggacgacgtcggcgggctccgggacgcgaagcaggccctccgagag
agcatcgtatggtcgctccagtcgccagagaaattcgatcggttgggaatcgattcggtc
acgggagtgcttctctacggaccaccggggacggggaagaccctgctcgcgaaagtcgtt
gcgaacgaagctgacgcgaacttcatcccggttcggggtcccgaaatactctcaaaatgg
acgggggagtccgaagcggcgatccgcgacacgttccggaaagcacgagagtctgcaccg
gcggtcgttttcttcgacgaactcgatagccttgcagctggccgttcacagggattgggt
ggggagagctcggatcgactcgtcaatcaactcctgaccgaactcgatggaatccaaccg
ctagaggacgtcatggtggtcggggcaacgaaccgcccggatatgctcgacgaagcaatc
ctgcggaccagtcgattcgatcgactcgtcaacgttggcgcaccggacgttgagggacgt
acacagatcttcaaggtacagacagatgacacaccactcgcatcggacgtgagtttccga
gacctcgcagagatgactgaagggtacgtcggaagtgacatcgaagcggtcgcccaagaa
gcagcaatcaaagcgttgcgtgaacaggcggagccatcagaggttgcactgcatcatttc
agcaaggcaattgcggatgttcgtccgaccatgacagagacagtcgaaacacggtacgaa
cgtatcacggacgacttcgagaatggccaactcgatgacggcagtgtcagtggaccacga
gggttccgttaa
DBGET
integrated database retrieval system
