Halorussus gelatinilyticus: M0R88_15585
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Entry
M0R88_15585 CDS
T08255
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
haxz
Halorussus gelatinilyticus
Pathway
haxz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
haxz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
M0R88_15585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
haxz03019
]
M0R88_15585
Messenger RNA biogenesis [BR:
haxz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
M0R88_15585
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Ortholog
Paralog
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GFIT
Motif
Pfam:
RNase_J_b_CASP
Lactamase_B_2
Lactamase_B
RMMBL
Motif
Other DBs
NCBI-ProteinID:
UPW02338
UniProt:
A0A8U0INK5
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All DBs
Position
3040483..3041826
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AA seq
447 aa
AA seq
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MEIEIATIGGYEEVGRQMTAVRAGEDIVIFDMGLNLSNVLIHDNVQTEQLHSLDLIDMDA
IPDDRIMSDLEGDVQAIVPTHGHLDHIGAISKLAHRYNAPIVASPFTLELVREEIQDEGK
FNVENDLVEMDAGETMGIGEHCELEFVNVTHSIIDAINPVLHTPEGAIVYGLDKRMDHTP
VLGDPIDMKRFRELGRERNGVLCYIEDCTNANKKGRTPSEAVARSQLRDLMMSLEDFDGG
ILATTFASHIARVTNLVEFAKEIGRQPVLLGRSMEKYSGAAERLGATTFPEDLGMYGHRK
SVDRTFKRIMKEGKENFLPVVTGHQGEPRAMLTRMGRGETPYDLDNGDKVIFSAGIIPEP
TNEGQRYQSERLLKMQGARIYDDVHVSGHISQEGHYQMLNTLQPQHVIPAHQNMQGFSGY
VDLAESQGYKLGRDLHVTSNGNTIQLV
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcgaaattgcgacaatcggcggctacgaggaagttggccgccagatgaccgcg
gtccgtgccggagaggacatcgtcatcttcgacatggggctcaacctctcgaacgtactg
attcacgacaacgtccagaccgaacaactgcactcgctcgacctcatcgacatggatgcg
attccggacgaccgcatcatgagcgatctcgaaggcgatgtgcaggccattgtgccgacc
catggtcacctcgaccacatcggcgcgattagcaaactcgcccatcgctataatgctccg
atcgtggcgtcgccgtttacgctggaactcgtcagagaggaaatccaggacgaggggaag
ttcaacgtcgaaaacgacctggtggagatggacgcgggcgaaacgatgggcatcggcgaa
cactgcgagcttgaattcgtcaacgtgacccactccattatcgacgccatcaacccggtc
ctccacacgcccgagggtgcaatcgtctacggcctcgacaagcggatggaccacacgccg
gtgctcggtgaccccatcgacatgaaacggtttcgggaactaggtcgtgagaggaacggc
gtgttgtgttacattgaagattgtaccaacgcaaacaagaagggtcggacccccagcgaa
gccgtcgctagaagtcaactccgagacctcatgatgagccttgaggacttcgacggcggc
atccttgccacgacgtttgccagtcacatcgctcgggtcacgaatctcgtcgaattcgca
aaggaaatcggacgccaaccagtcctcctcgggcggtcgatggagaagtactccggggca
gccgaacgcctcggggccacaaccttccccgaggatctcggcatgtacggccatcgcaag
tccgtagaccggacattcaaacgcatcatgaaagagggcaaggagaacttcctgccagtc
gtgacgggccaccagggcgaaccgcgggcaatgctcactcggatgggccgtggggagaca
ccgtacgatcttgacaacggcgacaaggttatcttctcggcagggatcattcctgagccg
accaacgagggccagcgctaccagtccgagcgcctcctgaagatgcagggcgcccgcatc
tacgacgacgtccacgtctctggccatatctcgcaggaagggcattaccagatgctcaat
acgctccagccccagcacgtaattccggcgcaccagaacatgcagggcttttcgggctat
gttgacctcgcagagagtcaaggctacaagcttggccgtgacctgcacgtgacttccaac
ggaaatacgattcagttggtgtaa
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