Haemophilus sp. oral taxon 036: C3V42_00295
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Entry
C3V42_00295 CDS
T05707
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
hay
Haemophilus sp. oral taxon 036
Brite
KEGG Orthology (KO) [BR:
hay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hay03016
]
C3V42_00295
Enzymes [BR:
hay01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
C3V42_00295
Transfer RNA biogenesis [BR:
hay03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
C3V42_00295
Prokaryotic type
C3V42_00295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
AVM59167
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All DBs
Position
complement(56546..57466)
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AA seq
306 aa
AA seq
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MSRPRKRWRDVDGVFLLDKPQGMSSNDIMQKVKRLFQANKAGHTGALDPLATGMLPICLG
EATKFSQFLLDADKRYLVTAKLGERTDTSDAEGQVVETREVHVETQQILTALEQFRGDIL
QVPTMFSALKHNGKPLYEYARQGITVEREARPITIFELNFIEYNAPFLTLEVHCSKGTYI
RTLVDDLGEVLGCGAHVTMLRRTAVADYPVAEMMPIDELQLLTESFPLSELDRLLLPTDT
AVSKLPALHLDAEQSKAIGFGQRVKFANDQQLSGQVRLFSAENLFLGVALIDGNIIRPQR
LITQSA
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgtctagacctcgtaaacgctggcgtgatgttgatggtgtgtttttgttggataaacca
caaggcatgtcatcaaatgatatcatgcaaaaggtaaagcgtttatttcaagcgaacaaa
gcggggcatactggcgcgctcgatccgttggctacgggaatgttgccgatttgcttgggt
gaagcaactaagttttcacaatttttgcttgatgccgataagcgttatcttgttacggca
aaattaggcgaacgtaccgatacttccgatgcggaagggcaagtcgtggaaacgcgtgaa
gttcatgttgaaactcagcaaattttgaccgcacttgaacaatttcgtggtgatattttg
caagtaccgacaatgttttctgcattaaaacataacggtaaaccgctttatgaatatgcg
cgccaaggtattacagttgagcgtgaggcacgcccaattacgatttttgaactcaatttt
attgaatataacgcgccttttttaactttagaagtgcattgttcaaaaggcacttatatt
cgcactttagtcgatgatttgggtgaagtgctaggttgtggcgcgcatgtgacaatgtta
cgccgtacagccgtagcggattaccccgtagcagaaatgatgccaattgatgagttacaa
ctgctcactgaaagttttccattaagtgaattagatcgtctattactgccaaccgatacc
gctgtaagtaaattgcccgctttgcatttggatgcagagcagagcaaagccattggtttt
ggtcagagagtgaaatttgctaacgaccagcaattaagtggccaagtgcggttattttca
gcggagaatttattcttaggcgtggcattgatcgacgggaatattattcgcccacaacgg
ttaatcacgcaatctgcataa
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