Haemophilus sp. oral taxon 036: C3V42_02640
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Entry
C3V42_02640 CDS
T05707
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
hay
Haemophilus sp. oral taxon 036
Brite
KEGG Orthology (KO) [BR:
hay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hay03016
]
C3V42_02640 (rnd)
Enzymes [BR:
hay01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
C3V42_02640 (rnd)
Transfer RNA biogenesis [BR:
hay03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
C3V42_02640 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
Motif
Other DBs
NCBI-ProteinID:
AVM59592
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All DBs
Position
543655..544812
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AA seq
385 aa
AA seq
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MIKECQNLPHFSLITTNTELSEICLLAQQQDIVALDTEFIRISTYFPKLGLIQLYDGKRV
SLIDPLIITDFSPFVKLLADSHVLKVLHSCSEDLVVFSQEFNQLPTPMIDTQIMARFLGL
GMSAGLAKLVQQYLNIKIDKGATRTDWIKRPLSKIQLQYAAGDVWYLLPLYHILQQELSQ
TPWLKAVKEDCELALIKTYKLKERDSNKAYLDIPNAWKLKPLELARLKVLATWRQNIAVK
RNLALSYIVKSEHLWKVAKYNPRNIAEMLELGLTHNEIRIYGKKILQLLVQASQISPNNY
PQKIVRISEDPRYKQTIRSLQEQVTALTPVGLSPEIIASKRTLEELIKWVWKKECSPNKL
PELLIGWRKQIGDILVKEIKIITNS
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgataaaagaatgccaaaatttaccgcacttttctcttattacaactaatactgagctt
tcagaaatttgccttttggcccaacaacaggatatagttgcgttagacaccgaatttata
cgcatatcaacttatttcccaaaactgggattaatccaactttatgacggcaaacgagtg
tctttaattgatccacttataatcactgatttttcgccttttgttaaactacttgctgat
tctcatgttctcaaagtattacattcttgtagtgaagacttagtagtgttctcgcaggaa
tttaatcagttgcctacccccatgatagatacacaaattatggctcgtttccttggactc
ggtatgtctgcaggtttggcaaaattagtccaacaatatctgaatataaaaatagataaa
ggtgcaactcgtactgattggattaaacgtcctctttcaaaaatacaattacaatatgcg
gcgggtgatgtatggtatttacttcctctgtatcacattctgcaacaagaactctcccaa
acgccttggttaaaagctgtaaaggaagactgtgaactcgcacttatcaaaacatataaa
ttaaaagaacgagattcgaataaagcctatttggatattccaaatgcatggaaactgaag
cctttagaattagctcgcttaaaagttttagcaacatggcgacaaaatattgctgtaaag
cgaaatttagccttgtcttatattgtaaaatcagaacatctttggaaagtagcaaagtac
aatcctcgtaatatagctgagatgcttgaactgggtctaactcataatgagatccgaatc
tatggaaaaaaaattcttcagctccttgtccaagctagccagatatctcctaataattat
ccacagaaaatagttagaatttctgaagatcctcgttataaacaaacaattcgttcacta
caagagcaagtgactgcactcactccagtagggctatcaccagaaatcatagcgagtaaa
cgaacattagaagaattaataaaatgggtatggaaaaaagaatgttcacccaataaatta
ccagaattactcataggctggcgtaaacaaataggtgatatattagtgaaagaaatcaaa
ataataacaaattcctag
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