Haemophilus sp. oral taxon 036: C3V42_02900
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Entry
C3V42_02900 CDS
T05707
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
hay
Haemophilus sp. oral taxon 036
Pathway
hay03030
DNA replication
hay03430
Mismatch repair
hay03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hay00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C3V42_02900 (holB)
03430 Mismatch repair
C3V42_02900 (holB)
03440 Homologous recombination
C3V42_02900 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hay03032
]
C3V42_02900 (holB)
03400 DNA repair and recombination proteins [BR:
hay03400
]
C3V42_02900 (holB)
Enzymes [BR:
hay01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
C3V42_02900 (holB)
DNA replication proteins [BR:
hay03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
C3V42_02900 (holB)
DNA repair and recombination proteins [BR:
hay03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
C3V42_02900 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
HolB_lid
S_layer_C
Motif
Other DBs
NCBI-ProteinID:
AVM59637
LinkDB
All DBs
Position
596684..597667
Genome browser
AA seq
327 aa
AA seq
DB search
MTALYPWLMPIYHQIAQTFDEGLGHHAVLIKADSGLGVERLFDALAQKIMCVAQGDKPCG
QCHSCHLMQAHSHPDYHELSPIGGKNIGVDQVRDINDIVAQHAQQNGNKVVYVQGAERLT
EAAANALLKTLEEPRTNTYFLLQTDSSASLLATIYSRCQVWNLSVPNEQIALDWLKSESA
AENQEILTALAMNLGRPLLALETLQQGLIEQRKNFLRQFWVFYRRRSPLELLPLFDKERY
VQQVDWILAFLSDCLKHKLEIDSHRQVADLGRGIEQFSDEQTALGLLQAIKIMQKVRSDL
LTINGVNVELMLLDSLTRLVTEVFETQ
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcactttacccttggttaatgccaatttatcatcaaattgctcaaacctttgac
gaaggtttggggcatcatgctgtgctgattaaagctgattctggtttaggggtagaacgt
ttatttgatgcacttgcgcagaaaataatgtgtgtggctcaaggcgataagccttgtggt
caatgccattcttgtcatttaatgcaggcccatagccatccagattatcatgaattaagc
cctattggcggtaagaatattggcgttgatcaggtacgcgacattaatgacattgtcgcg
cagcacgcacaacaaaacggtaataaagtggtgtatgtgcaaggagcggaacgtttaacg
gaagcggctgccaatgcgttattgaaaacattggaagagcctcgtacaaatacttatttt
ttacttcagacagatagttcagcaagtttattagcaaccatttatagtcgatgccaagtg
tggaatctgtccgtgcctaatgaacaaatagctcttgattggttgaaatcagaaagtgcg
gctgaaaatcaggaaattttgaccgcacttgcgatgaatcttgggcgtccgcttttagca
ttagagacgttacaacaagggcttattgaacagcgtaaaaacttcttacgtcaattttgg
gtgttctatcgccgacgttcaccattggaattgcttccgttgtttgataaagaacgttat
gttcagcaagtggattggattttggcttttctttccgattgtttaaaacataaacttgaa
attgatagtcatcgacaagttgccgatcttggccgtggcatagaacaattcagcgatgag
caaaccgcccttggtttattacaagcaatcaaaattatgcaaaaagtgcggtcagatttg
ctgacaattaatggtgtgaatgttgaattgatgctattagatagcttgaccagattagtc
acagaagtatttgaaacgcaataa
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