Haemophilus sp. oral taxon 036: C3V42_03235
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Entry
C3V42_03235 CDS
T05707
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
hay
Haemophilus sp. oral taxon 036
Pathway
hay03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hay00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
C3V42_03235 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hay03400
]
C3V42_03235 (recC)
Enzymes [BR:
hay01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
C3V42_03235 (recC)
DNA repair and recombination proteins [BR:
hay03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
C3V42_03235 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AVM59693
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All DBs
Position
658617..661991
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AA seq
1124 aa
AA seq
DB search
MFIVYYSNQLEKQKEILSSLFKSLPPEDPFQQDIILVQSPGMAQWLQIELAKETGISANL
KFPMPASFIWQLYAQNLPATALENPFDKDSMTWRLMRLIPTFLEKESFSPLRNYLASSPH
SEQYKLYQLSSKIADLFDQYLVYRPEWILAWEKGEDEQITAQIQKQQPNLNTTLFAQIQG
NTKWQGELWHALVVDVKSDVGDATHRAALHNQFLALLADKKAPKKLPSRIFIFGIPALPT
AYLNILQAMSSEVDIHLFFNNPCQEYWGDIRDLRLDYLRSRKRYQFNKQDKNQPLFSEDQ
LSQLENAQFDVTYQKENLQVGNPLLAAWGKMGRDFLYTLVRDEEHIPTYPVNAYQEIKSN
SLLGQLQSQILHLENKPLNIAKNDRTLTLHSCHSAMREVEILHDYLLDLFNQDPNLTPKD
VVVMVADINQYTPYIQAVFGQKNGDAPQIPFSLSDNKLSESDVLVSSYLTLLRLKESNFS
AEDVLALLDIPAMRERFNISLADLPLVREWVADSGIRFGLQKNQDGINFNSWQAGLERMM
LGYAMREEHGIWQDSLGLNSSYGLKGELAGNLSHFFTALSALHETLQQAHSIEKWQEILT
ALLSDFFVQNEDTSDTIFYIQEKINELAEHLKTLHFTEELQADVIADVITMKLEDAPNSL
KFLAGKVNFCTLLPMRSVPFKVVCLLGMNDADYPRTQTPNSFDLMQYHHQKGDRVRRDDD
RYLFLEALLAARDYCYISYVGRSITDNQPKEPSVLVSQLVDYINQGQSENTLTVIEHPMT
AFSPDNFKYNEKFTRSFATKWLPIAQFDATASNSEFAVTMTENPEKIEEIELDRLVSFVE
NPVKFFFEKQLGVYFRDEDDRIADSENFTLSGFDNYALNNDLIYLDEQNFSDYFRQAEVK
GVLPRAEFGKVYAENIRDNVLEFKKKIADLGEAKHASVDFNLSVNWHNENQEIRLFGYME
PLFGDDSQVIQWHFAKYKDRYCIRPWIYYLIQCVTQENAVPPKLITQDQVIELPPIERKT
ALAQLETYVKDYLQSQIEIQLVPTVRNVNDFIVDDESAVDFDNISTKLQELGEDSNYGAQ
ADPYWSRVLAQTSRFEQTGNIEKLLKQTKDWFGLLFVQKKTRKA
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
gtgttcattgtttattattccaatcaactcgaaaaacaaaaagaaatcctttcttcctta
ttcaaatctttaccgccagaagatccttttcagcaagatattatcttggtgcaaagccca
ggtatggcgcaatggctgcaaattgaattagcgaaagaaacaggcatttcagcgaaccta
aaatttcctatgccagcaagttttatttggcaactttatgctcagaacttacctgcaacg
gcattggaaaacccttttgataaagattcaatgacatggcgtttaatgcgattaatcccg
acttttctcgagaaagaaagtttttcacctttacgcaattatttagcgtcctcgccacat
tctgaacaatacaaactttatcaactcagcagcaaaattgccgatttatttgaccaatat
ttagtttatcgaccagaatggattttagcttgggaaaaaggcgaagatgaacaaatcacc
gctcaaatacaaaaacaacaacctaacctaaacacaactttgtttgcgcaaattcaaggc
aatacaaaatggcaaggtgagttatggcatgcattggtcgtcgatgttaaatcagatgtt
ggtgatgccacacatcgagcggctttgcataatcagttcttagccttgcttgccgataag
aaagcaccgaaaaaattaccttcacgcatatttatttttggtattccagcacttccaact
gcttatctcaatattttgcaagcgatgtcatcagaagtggatattcatttattttttaat
aatccatgccaagagtattggggagatattagagatttacgccttgattatttgcgttct
cgcaagcgttatcaattcaataaacaagataaaaatcaaccgctgttttccgaggatcaa
ctttctcaactagaaaacgctcagtttgatgtcacttatcaaaaagaaaaccttcaagta
ggcaatccgttactggctgcttggggaaaaatggggcgagattttctttacaccttggtg
cgagatgaagaacatattccaacttatcccgtcaatgcttatcaagaaattaaatcgaac
agtttgcttgggcaattgcagtctcaaattctgcatttagaaaataaaccgctaaatatc
gcaaaaaatgaccgtactttaaccctacattcttgccacagtgctatgcgtgaagtggaa
atattgcacgattatttattagatttatttaatcaagatcctaaccttacgccaaaagat
gtggttgttatggtggcagatataaaccaatatacaccttatattcaggcagttttcggg
caaaaaaatggggatgcgccacaaattccattttcactttcggataataaactttcagaa
agtgatgtgttggtatcaagttacttaactttattgcgcttaaaagaaagcaattttagt
gcagaggacgtcttagcgttgctggatattcctgcgatgcgagaacgatttaatatttct
cttgctgatttgccattagtgcgagaatgggtggcggattcagggattcgtttcggtttg
caaaaaaatcaagatggtatcaatttcaattcttggcaggcaggattagaacgaatgatg
ttaggttatgcgatgcgtgaagaacacggtatttggcaagatagcctagggttaaacagc
agctatggcttaaagggtgaacttgctggaaatttatctcactttttcaccgcactttca
gcgttgcatgaaacgctgcaacaagcacattccatcgaaaaatggcaagaaattttaacc
gcgcttttatcagatttcttcgtgcaaaatgaagacacaagcgacacgattttctatatt
caagagaaaattaatgaattagctgagcatctaaaaactctccattttactgaagaattg
caagcagacgtgattgccgatgtcatcacaatgaaattggaagatgcgccaaatagcctc
aaattccttgcaggaaaagtaaacttctgcaccttattaccaatgcgttcagtgccattc
aaggtagtttgtttacttggaatgaatgatgcggattaccctagaacacaaacaccaaac
agttttgatttaatgcaatatcaccatcaaaaaggcgaccgtgttcgccgtgatgatgat
cgctatttgttcttagaagccttattggcagcacgtgattattgctatatcagctatgtt
ggccgttccattacagataatcaaccgaaagaaccttctgtattggtaagtcaactcgtg
gattatattaatcaaggtcaaagcgaaaatacccttacggtgattgagcatcccatgacg
gcatttagcccagataatttcaaatataacgagaaatttacccgctcttttgcgacaaaa
tggttgccaatagcacaatttgacgcaacagctagcaattcagaatttgccgtcactatg
acagaaaacccagaaaaaatagaagaaattgaactggatcgtttagtcagctttgtggaa
aatccagtgaaatttttctttgaaaaacaactcggtgtctatttccgtgatgaagatgat
cgtattgccgacagtgaaaatttcaccttaagtggattcgataattacgcgctcaataat
gacttaatctaccttgatgaacaaaatttttctgattattttagacaagcagaagtaaaa
ggcgtgttacctcgagccgaatttggaaaagtttatgctgaaaatattcgagacaatgtt
ttggaatttaaaaagaaaatagcggatcttggtgaagccaaacatgcttccgtcgatttc
aatttatccgtaaattggcacaatgaaaatcaagaaattcgtctatttggttatatggag
cctttatttggcgatgattcacaggtgattcaatggcattttgcgaaatacaaagatcgc
tattgtatccgtccttggatttattatttgattcaatgtgttacacaagaaaatgcggta
ccaccaaaattaattacgcaagatcaagttatcgaattaccgcctattgagcgcaaaacc
gctctcgctcaattagaaacttacgtaaaagattatttacaaagtcaaatagaaatccaa
ttggtgccaacggtaagaaatgtgaatgattttattgtggacgatgaaagtgcggtagat
tttgacaatatttctacaaaacttcaggaactgggcgaagacagcaattacggcgctcaa
gcagatccatattggtcacgcgtattggcgcaaacctcaagatttgaacaaactggaaat
atcgaaaaattattaaaacaaacaaaagattggtttggcttattattcgtacaaaagaag
acaagaaaggcataa
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