Haemophilus sp. oral taxon 036: C3V42_03895
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Entry
C3V42_03895 CDS
T05707
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
hay
Haemophilus sp. oral taxon 036
Brite
KEGG Orthology (KO) [BR:
hay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hay03021
]
C3V42_03895
Transcription machinery [BR:
hay03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
C3V42_03895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Helicase_C
SNF2-rel_dom
Tudor_RapA
ResIII
DEAD
Cas3-like_C_2
AAA_22
DUF123
Motif
Other DBs
NCBI-ProteinID:
AVM59816
LinkDB
All DBs
Position
complement(794474..797245)
Genome browser
AA seq
923 aa
AA seq
DB search
MPFAIGQRWLSESENALGLGIITALDQRTVTIYFPAADETRIYAAAQAPLSRIVFSKGET
LSHQAGWQGEILNVQNMNGLLFYLVKNPQGEDVIVQERDISPIISFSQAKDRLFSAQIDR
SSHFALRYRTLCHQQAQFKSPLRGLRGTRAGLIPHQLHIAAEVGNRVNPRVLLADEVGLG
KTIEAGMILQNQLFAEKVQRVLIIVPETLQHQWLVEMLRRFNLHFSLFDEERCNDFDLDA
VNPFTTESLIICSLNWLETHPNRVEQALDAQFDCLIVDEAHHLVWSESSQSAAYLLVEQL
ARIIPSVLLLTATPEQLGQESHFARLRLLDPERFFDYQTFVKEQERYQPVVNAVESLVAN
KALSAVEKNHISDLLLEQDVEPLFRAIASNNDEEQHRARQELIQALIDRHGTGRMLFRNT
RQGVKGFPHRVYHQITLSEENDKIDWLIDFLKLHRDEKIFVICQTAATAIQLEQILRERE
AIRAAVFHEKMSIIERDRAAAYFADLENGAQVLLSSSIGSEGRNFQFAANLVLFDLPTNP
DLLEQCIGRLDRIGQKRDVQIYVPCVKDSPQSCLARWYNEGLNAFEQTCPMGMALFAQFS
DELEKVRSNSTALSENEFSELLKQTKTAREKLKIELEKGRDRLLELNSHGGEQAQALADQ
IADEDNSPELVNFALKLFDIIGVEQEDLGANSIVISPTGTMLVPDFPGLKEEGVTVTFDR
ELALAREEMEFLTWDHPMIRQGIDLVASGDIGKAAMALLVNKQLPAGTLLIELIYVVESQ
SPKGLQLNRFLPPTPIRLLLDNKGNNIGEQVAFETLHSKLKPLGKNIANQMVKMARSNIE
ALITRGDQLVKSLAEPIIAEAKNQADQQLSAEINRLQALRAVNKNIRQSEIDILEQQRTQ
SLDELSKANWRLDCLRVIVTNKE
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atgccctttgctattggtcagcgctggttgagtgaaagtgaaaacgctttaggattaggt
atcattaccgcattagatcaacgaactgtcacgatttatttcccagctgcagatgaaacg
cgtatatatgctgctgcacaagcgcctttaagccgaattgtatttagcaaaggtgaaaca
ttatctcatcaagctggttggcaaggtgagattttaaacgttcaaaatatgaacggttta
ctcttttatttagttaaaaatccacaaggtgaagatgtcattgtgcaagaacgtgatatt
tcaccgattatttcttttagccaagcgaaagatcgtttgttttcagcgcaaattgatcgc
agcagtcattttgcattgcgttatcgcacgctttgtcatcagcaagcacaatttaaatcg
ccattgcgtggtttgcgtggaacgcgtgcgggtttaattcctcatcagcttcatattgca
gctgaagtcggtaatcgagttaatcctcgtgtgttattggcggatgaggttggtttaggg
aaaaccattgaagctggaatgattttgcagaatcaactttttgctgagaaagtgcaacgt
gttcttattatcgtgccagaaacgttgcaacatcaatggctggtagaaatgcttcgtcgt
tttaatttgcatttttcactttttgatgaagaacgttgcaacgattttgatcttgatgcc
gttaatccatttacaacggaaagcttaattatttgttcgctgaattggttagaaactcat
cctaatcgagtagagcaggcgcttgatgctcaatttgactgtttaattgtggatgaggca
catcacctcgtgtggtcagaatcttcacaaagtgcggcttatttattagttgaacagctt
gctcgcatcattccatccgtcttgttactcacggcaaccccagaacaacttgggcaagaa
agtcattttgctcgtttgcgcttactggatccagaacgtttttttgattatcaaaccttt
gtgaaagagcaggaacgctaccaacctgtggttaatgctgttgaatctttggtggcaaat
aaggcattaagtgcggtagaaaaaaatcatatttctgatttgttgcttgaacaagatgtc
gagcctctttttagagcgattgcatcaaataatgatgaggaacaacatcgtgcccgtcag
gaactgattcaagccttaattgatcgtcacggcactgggcgaatgctgttccgcaataca
cgtcaaggcgtgaaaggttttccgcaccgtgtttaccaccaaattacactctcggaagag
aatgataaaattgattggctgattgatttcctcaaactccatcgcgatgaaaaaattttt
gtgatttgtcagactgcggccacggcgattcagttagaacaaattttacgtgaacgtgag
gcgattcgtgccgcagtgttccacgaaaaaatgtcgattattgaacgggatagagccgcg
gcttattttgcggatttagaaaacggcgcacaggttttactgagctcgagtattggctcg
gaagggcgtaattttcaatttgcggcaaatttagtgttatttgatttaccgacaaatcct
gatttattggaacaatgtattggccgattagaccgtattggacaaaaacgtgatgtgcaa
atttatgtgccttgtgtgaaagattcgcctcaaagttgtttagcgcgttggtacaatgag
gggctgaatgcttttgaacaaacttgtccaatgggaatggcattatttgcccagttttct
gatgagttggaaaaagtgcggtcaaattctaccgcactttcagagaatgaattttctgaa
ttattaaaacaaactaaaaccgcgcgagaaaaactcaagattgagttagaaaaaggtcgt
gatcgtttattagagctaaattctcatggcggtgagcaggctcaagcgttagcggatcaa
attgctgatgaagataattcgcctgagcttgtgaattttgctttaaaattatttgatatt
attggcgtagagcaagaagatcttggggctaatagtattgtaattagtccaactgggaca
atgcttgtgcccgattttccgggtttaaaagaagaaggtgtgacggtcacctttgatcga
gaacttgcccttgctcgcgaagaaatggaattcttgacttgggatcatcctatgattcgt
caaggtattgatcttgttgcttcaggtgatattggcaaagctgcaatggcattgcttgta
aataaacaactgcccgctggaaccttattaattgaattaatttacgtggtggaaagccaa
tcgccaaaagggttacagctcaatcgtttcttgccgccaacgcctattcgtctgctgctt
gataacaaaggaaataacattggtgagcaggttgcctttgaaacattgcatagcaaattg
aaaccacttggtaaaaatattgccaatcaaatggtgaaaatggcacggagcaacattgaa
gccttgattacacgaggcgatcaactggtaaaatccttggcagaaccgattattgctgaa
gctaaaaatcaagcagatcaacaattaagcgcagaaattaaccgtttacaggctttgcga
gcggtaaataaaaatattcgtcaaagcgaaattgatattttggaacaacaacgaacacaa
tcactggacgagctttctaaagcaaattggcgtttggattgcctgcgtgttattgtgacg
aacaaggaataa
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