Haemophilus sp. oral taxon 036: C3V42_05160
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Entry
C3V42_05160 CDS
T05707
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
hay
Haemophilus sp. oral taxon 036
Pathway
hay03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hay00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
C3V42_05160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hay03021
]
C3V42_05160
03400 DNA repair and recombination proteins [BR:
hay03400
]
C3V42_05160
Enzymes [BR:
hay01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
C3V42_05160
Transcription machinery [BR:
hay03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
C3V42_05160
DNA repair and recombination proteins [BR:
hay03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
C3V42_05160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
BetaGal_dom3
Motif
Other DBs
NCBI-ProteinID:
AVM60040
LinkDB
All DBs
Position
1060121..1061110
Genome browser
AA seq
329 aa
AA seq
DB search
MQGSVTEFLKPRLVDIEQISSTHAKVILEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IDGVLHEYSSKEGVQEDILEVLLNLKGLAVKVQNKDDVILTLNKSGIGPVVAADITHDGD
VEIVNPNHVICHLTDENASISMRIRVQRGRGYVPASARTHSQAEERPIGRLLVDACYSPV
DRIAYNVEAARVEQRTDLDKLVIELETNGTLEPEEAIRRAATILAEQLDAFVDLRDVRQP
EIKEEKPEFDPILLRPVDDLELTVRSANCLKAETIHYIGDLVQRTEVELLKTPNLGKKSL
TEIKDVLASRGLSLGMRLENWPPASIAED
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgcagggttctgttacagaatttttaaaaccacgtttagtagatattgaacaaattagt
tcaactcatgctaaagtgatcttagagccgttagagcgtggttttggccatactctaggt
aatgcattacgtcgtatccttctgtcttcaatgccaggttgtgctgtaactgaagtggaa
attgatggcgtattgcacgaatatagtagtaaggaaggtgttcaagaagatattcttgaa
gttcttttaaaccttaaaggtctagcggttaaagtacagaataaagatgatgttattctg
acactaaataaatctggaattggccctgttgttgcagcggatattacccatgatggtgat
gttgaaattgtgaatccgaatcatgtaatctgtcacttaactgacgaaaatgcatccatc
agtatgcgtattcgagttcagcgtggtagaggatatgttccagcttcagctcgcactcat
agtcaagcagaggagcgtccaattggtcgcttacttgttgacgcttgttacagcccggtt
gatcgcattgcatataatgttgaagcagctcgtgttgaacagcgtactgacctagataaa
cttgttattgagttagaaactaatggtacgcttgagcctgaagaagcaattcgtcgtgct
gcaacaatcttagcagagcaactcgatgcattcgttgatttgcgtgatgttcgtcaacct
gaaattaaggaagaaaaaccggaatttgatccgattttattacgtcctgtagatgattta
gagttgacagttcgttctgctaactgtttgaaagcagaaacaattcattatatcggtgat
ttagtacaacgtacagaagttgaattattaaaaacacctaatcttggtaagaaatctctt
actgaaattaaggatgtgctcgcttcacgtggcttgtcacttggtatgcgccttgaaaat
tggccaccagcaagtattgctgaagactag
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