KEGG   Haemophilus sp. oral taxon 036: C3V42_05450
Entry
C3V42_05450       CDS       T05707                                 
Symbol
cas8c
Name
(GenBank) type I-C CRISPR-associated protein Cas8c/Csd1
  KO
K19117  CRISPR-associated protein Csd1
Organism
hay  Haemophilus sp. oral taxon 036
Brite
KEGG Orthology (KO) [BR:hay00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:hay02048]
    C3V42_05450 (cas8c)
Prokaryotic defense system [BR:hay02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Subtype I-C factors
    C3V42_05450 (cas8c)
SSDB
Motif
Pfam: Cas_Csd1 XMAP215_CLASP_TOG UL45
Other DBs
NCBI-ProteinID: AVM60087
LinkDB
Position
1115282..1117060
AA seq 592 aa
MILASLARYYRRLAAENDDMGNPKVPPYGFSEEKIGWILVLDKEGRLKTVVPNLTADKKP
QPKLMSVPRPEKRTSGIKPNFLWDKTAYALGVEANKNKAEAKEKPFTPSEKNFDAFKQYH
LDLLQNSDDEGLQALCRFLQNWQPAHFAAANLPAEMLDANIAFSLEKPTALIHKREAAQT
LWAGCLKSDEALEGLCLISGDTAPIARLHPAIKGVFGGQSSGGSIISFNKEAFASFGKEQ
GANAPVSEQSAFAYTTALNYLLRRENNHCLTIGDASTVFWAEADDNATVQAAEGFFAHVF
TPPDDEQESTKVFNVLEQIGKGRPLQEIAPELSPNTRFYILGLAPNAARISVRFWLDTAF
GQLAKNLAQHWQDLAIEPCAWKTPPSIWRLLLQTAVLGKSENISPVLAGEMTRAVICGTP
YPLSLLSQLITRIRADGDVNGLRVAMMKAVLERRFRKGFIEEGVPMSLNNESPNRAYLLG
RLFAVLERIQYQALGELNAGIADRYYGSASAVPFSVFPRLLSGAKHHLSRLRKDKAGMAV
NLDKDLGEIIAKLPEIFPRHLSIDEQGRFAIGYYHQKQSYFAKKETAEIIEN
NT seq 1779 nt   +upstreamnt  +downstreamnt
atgattcttgcatcccttgcccgctattaccgccgtttggcagcggaaaatgatgacatg
ggcaatccgaaagtgccgccttatggctttagtgaggagaaaatcggctggattttggtg
ttggataaagaaggtcgtctgaaaaccgttgtgccgaatctgactgccgataaaaagccg
cagccgaagctgatgagcgtgccgcgccctgaaaaacgcacatcgggcatcaagccgaat
tttttgtgggataaaaccgcctacgcgcttggcgtggaagccaataaaaacaaagccgaa
gccaaagaaaaaccgtttacgccgtctgaaaaaaactttgacgcctttaagcaataccat
ctcgatttactgcaaaacagcgacgatgaaggcttgcaagccttgtgccgttttctgcaa
aactggcagcctgcacattttgccgccgcaaatctgcctgccgaaatgctggatgctaac
attgcattttctcttgaaaaaccgaccgcacttatccataaacgcgaagccgcacaaacc
ttgtgggcaggctgcctgaaaagcgatgaggcgcttgagggcttgtgcttgattagtggc
gatacagccccgattgcgcggctgcatccggcgattaaaggcgtgtttggcggacaaagc
tccggtggctcgattatttcgtttaacaaagaagcctttgcctcgttcggcaaggagcaa
ggcgcaaatgcgcctgtttccgaacaatccgcctttgcctacaccaccgcgctgaattat
ctgttgcgtcgcgaaaacaatcactgcttgaccatcggcgatgccagcacggtcttttgg
gcggaagcggatgataacgccacggtgcaggctgccgaaggctttttcgcgcacgtgttc
acgccgccggatgacgaacaagaaagcaccaaagttttcaacgtattggaacaaatcggc
aaaggtcgcccgctgcaagaaattgcgcccgaactctctcccaatacccgtttttacatc
ttagggcttgcccctaatgccgcgcggatttctgttcggttttggctggacactgcattt
gggcagctggcgaaaaatttggcgcagcattggcaagatttagccatcgagccttgcgca
tggaaaacgccaccatctatttggcgactcttattgcaaaccgccgtattgggcaaaagc
gaaaacatctcgcccgtattggcaggcgaaatgacccgcgccgtgatttgcggcacgccg
tatcccttaagtttgctgtcgcaactgattacccgaattcgcgccgacggcgacgtgaac
ggtctgcgcgtagcaatgatgaaagccgtattagagcggcgttttagaaaaggttttatc
gaagaaggagttcctatgagtttgaacaatgaaagcccgaatcgcgcctatcttttagga
cggctgtttgccgtgttggagcgcattcaatatcaggcgttgggcgaattaaacgccggt
atcgccgaccgctattacggctctgcatctgccgtgccattttccgtttttccgcgtctt
ttgtcgggtgcaaaacaccatttgtcgcgtttgcgtaaagacaaagccggcatggcggtg
aatttggataaagatttgggcgaaatcattgccaaactgcccgagatctttccgcgccat
ctaagcattgacgagcaaggccgctttgccatcggctattaccaccaaaaacaaagctat
tttgctaaaaaagaaaccgctgaaattattgaaaactaa

DBGET integrated database retrieval system