Haemophilus sp. oral taxon 036: C3V42_05855
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Entry
C3V42_05855 CDS
T05707
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
hay
Haemophilus sp. oral taxon 036
Pathway
hay03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hay00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
C3V42_05855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hay03400
]
C3V42_05855
Enzymes [BR:
hay01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C3V42_05855
DNA repair and recombination proteins [BR:
hay03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
C3V42_05855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
ResIII
Helicase_C
Zn_ribbon_PriA
AAA_30
PriA-like_WH
Zn_ribbon_6
IBR_1
AAA_19
DUF2509
Motif
Other DBs
NCBI-ProteinID:
AVM60158
LinkDB
All DBs
Position
complement(1208836..1211028)
Genome browser
AA seq
730 aa
AA seq
DB search
MKIVRVALAVPLPRLFDYLVPDDVSLQIGMRVLVPFGTQKRVAIVANFPTKSDVPEDKLK
AILQPLDLAPLFTPIYWDWLHWAANYYQAGLGDVLFQALPVKLRNGESAVKNDRTFWRIT
DAGKNALEQGLLKRSKKQVEALQCLSEIDLEKGNNEFSSAIWSTLKAKGFIEEITIQTTP
LSWQQSLGNNPIVNAENRLTLNKQQSLAFSQLLFHSGFNVWLLDGVTGSGKTEIYLQYIE
EILKSGKQVLVLVPEIGLTPQTVHRFKARFNVEIDVLHSNLTDTQRLYVWDRARSGQSAI
VIGTRSALFTQFSNLGAIILDEEHDASYKQQDSWRYHARDLAIVLAQKLNIAVLMGSATP
SLESINNVQNGKYQHLVLSKRAGSSTALRHFVIDLKNQYIQNGLSKPLLERMKAHLEKGN
QVLLFLNRRGFAPVLLCHECGWIAQCPHCEKPYTYHQHQNVLRCHHCGAQKTIPRQCGDC
GSTHLVTTGLGTEQLEETLKMLFPHYSVARIDRDSTARKGKLEGYLEDIQQGKSQILIGT
QMLAKGHHFPNVTLVALVNVDSALFSLDFRAEERLAQLYIQVAGRAGRADKQGEVVLQTH
YPDHPLLTTLLANGYQAFAKETLQLRHSMGLPPFTFQALFKAQARHSELAENCLSQIVDF
FQSKQITGLQMLGPMPAPFSKKAGQYRWQLLLQHPSRMTLQKALREYQQAELEKNSQVRL
ILDIDPQDLS
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattgtccgagtggcactggctgtgccgcttcctcgtttatttgattatctcgtc
cccgatgatgtttcattacaaatcggtatgcgtgttcttgtgccttttggtacgcaaaaa
cgcgtagcgattgtggctaatttcccaacaaaatcagacgttccagaggataaacttaaa
gccattcttcaaccattggatttagcaccgctctttaccccaatttattgggattggctt
cattgggcagcaaattattatcaagcgggattaggcgatgtgttatttcaagccttgcct
gtgaaattgcgtaacggcgaaagtgcggtgaaaaatgaccgcactttttggcgaattaca
gatgcggggaaaaatgcccttgaacaaggcctgttaaaacgctcgaaaaagcaagttgaa
gccctacaatgcttatctgaaatagatcttgaaaaaggcaataatgagttttcctctgcg
atttggtcaaccttaaaagccaaagggtttattgaggaaattactatccaaacaacgccc
ctaagctggcaacaaagcttaggcaataacccaattgtcaatgctgaaaatcgtttaacc
ttaaataagcagcaatccttagcgtttagccaattgctctttcattctggcttcaatgta
tggctgctcgatggggtgactggttcaggtaaaacagaaatttatctgcaatatattgaa
gaaattttaaaatcgggtaagcaagtattagtacttgtacccgaaatcgggctaacacca
caaacagtgcaccgtttcaaagcgcgtttcaacgtagaaattgatgtgctgcattctaat
ttaaccgatacgcaacggctttatgtatgggatcgtgctcgttcaggacaaagtgccatt
gtgattggcacgagatcggcattgttcacgcaattttctaatcttggtgcaattattttg
gatgaagaacacgatgcgtcttacaaacagcaagacagctggcgttatcacgcgcgagac
ttggcgattgtgctagctcaaaaactgaatattgccgtattaatgggttccgccacgcca
agtttagaaagtattaataatgtacaaaacggcaaataccaacatttagttttgtcaaaa
agagcggggagttccaccgcacttcgccattttgttattgatttgaaaaatcaatacata
caaaacgggctttcaaaacctttattggaacgaatgaaagctcatctagagaaaggcaat
caagtgttacttttcttgaatcgtcgtggctttgcgcccgtattgctttgccacgaatgt
ggttggatcgcacaatgccctcattgtgaaaaaccttatacctatcatcagcatcaaaat
gtattgcgttgtcatcattgtggcgctcagaaaactattcctcgacaatgtggtgattgt
ggctcgactcatttagtcactacaggtctcggcacggaacaattagaagaaaccttgaaa
atgctatttcctcattattctgtagcgcgaatcgaccgcgatagcactgcgcgtaaagga
aaattggaaggttatttagaagatattcaacaaggcaaaagtcaaattttgattggcaca
caaatgcttgcgaaaggacatcattttccgaatgttactctcgttgccttagtgaatgta
gatagtgcattattttcactggattttcgtgcagaagaacgtttagctcaactttatatt
caagttgctggacgtgcagggcgtgccgataaacaaggcgaagtcgtgctacaaacacat
tatcctgatcatcctttgctcactacgttattagcgaatggctatcaagcttttgcaaaa
gaaaccttacaattacgccattcaatgggattgccgcctttcactttccaggcgttattc
aaagcacaggctagacattctgagcttgcagaaaattgcttaagccagattgtagatttt
tttcaatcaaagcaaatcacgggattgcaaatgcttggtccaatgcctgcaccgttcagc
aaaaaagcagggcaatatcgctggcagttattattgcaacatccgtcaagaatgacgttg
caaaaagcattgagagaatatcaacaagccgaacttgaaaaaaacagccaagtgcggtta
attttggacatcgatccgcaagacttatcataa
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