Haemophilus sp. oral taxon 036: C3V42_06255
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Entry
C3V42_06255 CDS
T05707
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hay
Haemophilus sp. oral taxon 036
Pathway
hay03420
Nucleotide excision repair
hay03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hay00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
C3V42_06255 (uvrD)
03430 Mismatch repair
C3V42_06255 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hay03400
]
C3V42_06255 (uvrD)
Enzymes [BR:
hay01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C3V42_06255 (uvrD)
DNA repair and recombination proteins [BR:
hay03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
C3V42_06255 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
C3V42_06255 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_12
PhoH
Motif
Other DBs
NCBI-ProteinID:
AVM60233
LinkDB
All DBs
Position
1285904..1288084
Genome browser
AA seq
726 aa
AA seq
DB search
MDISELLDGLNDKQREAVAAPLGNHLVLSGAGSGKTRVLTHRIAWLIAVENISEGSIMAV
TFTNKAAAEMRHRIQATLAKHAQHQLFGMWIGTFHSIAHRLLRAHHLDVGLPQDFQILDS
EDQLRLIKRLLKLHNFDEKAFPPKQACWYINNKKDEGLRPNDIEDFNDRQEREWIKIYKI
YQDTCDRAGLVDFAELLIRAYELFEKKPLILQRYQQRFQHILVDEFQDTNKIQYKWIKIL
AGETGKVMIVGDDDQSIYGWRGAQIENIQKFLKDFKAETIRLEQNYRSTANILNSANELI
ANNTDRLGKNLWTEGEKGDPVGIYAAFNELDEAKFVASQIQDWVEHGGKLDDCAVLYRSN
SQSRVIEEALIRCQIPYRIYGGMRFFERQEIKDALAYLRLINNRQDDAAFERVINTPTRG
IGDRTLDILRNLTRERQITLWQAVQIGTQENMLAGRASTALLRFQELINSLQRDTAEMPL
FAQTDFVIKHSGLYEMYKQEKGEKGEVRIENLEELVTATREFIKPDDAEDMTELTAFLTH
ASLEAGEEQASPHQSCVEMMTLHSAKGLEFPRVFMVGVEEGLFPSFRSFEEPGRLEEERR
LAYVGITRAKKKLTISYAESRRLYAKEERHLPSRFIAELPRECIQEIRLRGTVTRAMNLA
KVGSLSNTSAVENEWKMGQKVKHEKFGFGTVINVEGSDNNTRLQIAFQAQGIKWLIAHLA
KLEKVR
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atggatatttctgaattacttgacggacttaacgataaacaacgcgaagccgtagctgct
cctcttggtaatcacttagtgctatcaggtgcaggctctggcaaaacgcgtgtattgaca
caccgtatcgcttggttaattgcggtagaaaatatttctgaaggcagcattatggcagta
acgtttaccaataaagcagcagcagaaatgcgtcatcgtattcaagctacccttgctaaa
cacgcacaacatcaattatttggtatgtggattggcacctttcacagcattgcccatcgt
ttattgcgagctcatcatttagatgtaggattgccacaagatttccaaattttggattca
gaagatcaacttcgtttaattaaacggttattaaaattacataattttgatgagaaagct
tttccgccgaaacaggcttgttggtacatcaataacaaaaaagatgaaggcttgcgacca
aacgacattgaagattttaatgatcgtcaagagcgtgaatggattaaaatttataagatc
tatcaagacacttgcgatcgtgcaggattggtcgattttgctgaattattaattcgggcc
tatgaattatttgagaaaaaaccattaattctgcaacgttatcaacaacgttttcagcat
attttggtggatgaatttcaagacaccaataaaattcaatataagtggattaaaattctt
gctggagaaacgggcaaagtcatgatagtaggcgatgacgatcaatctatatacggttgg
cgtggcgcacaaatcgaaaatattcaaaaattcttgaaagatttcaaagccgaaacaatc
cgccttgaacaaaactatcgttctaccgccaatatcctaaacagcgcaaatgaattaatt
gcaaacaatactgatcgtcttggtaaaaatttatggacagagggtgaaaaaggcgatcct
gtgggcatctatgccgcctttaatgaattggacgaagcaaaattcgttgcttcacaaatt
caggattgggtagaacatggtggaaaacttgatgattgtgctgtactttatcgtagtaat
agccaatcacgcgttattgaagaagccttaattcgttgtcaaattccatatcgtatttat
ggcggtatgcgtttcttcgaacgtcaagaaattaaagatgctttagcctatcttcgttta
attaataatcgtcaagatgatgctgcttttgagcgtgtaattaatacgccaacccgtggt
attggtgaccgcactttagatatattgcgcaacttaacacgcgaacgtcaaattacctta
tggcaagcagtacaaatcgggacacaagaaaatatgttggcagggcgagcctcaacagca
ttattgcgtttccaagaattaattaattcactacaacgtgataccgcagaaatgccgctt
ttcgcacaaactgattttgtgattaaacattcgggtttatatgaaatgtataaacaagaa
aaaggtgaaaaaggcgaagtccgtattgaaaacttggaagaattggttaccgcaacccgt
gaattcatcaaacctgatgatgcagaagatatgactgagcttaccgcctttttaactcac
gcctctttagaagctggtgaagaacaagcctctccgcatcaatcttgtgtagaaatgatg
acattacactccgctaaaggcttggaatttcctcgtgtatttatggttggcgtagaagaa
ggtttattcccaagtttccgttcttttgaagaacctgggcgtttagaagaagaacgtcgt
ttagcttacgtcggtattactcgcgcgaagaaaaaactgaccatctcttatgcggaaagc
cgtcgattatatgccaaagaagaacgccatttaccatcacgttttatcgccgaattacct
agagaatgtatccaagaaattcgtttacgaggaactgtcacgcgcgcaatgaatctagca
aaagtcggttcattgtctaatacaagtgcggtcgaaaatgaatggaaaatgggtcaaaaa
gtcaaacatgaaaaattcggttttggcaccgtcattaatgtcgaaggatcagataacaat
actcgcctccaaattgccttccaagcgcaaggcattaaatggctcattgcacatttggca
aaactggaaaaagtgcggtag
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