Haemophilus sp. oral taxon 036: C3V42_08010
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Entry
C3V42_08010 CDS
T05707
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
hay
Haemophilus sp. oral taxon 036
Brite
KEGG Orthology (KO) [BR:
hay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hay03400
]
C3V42_08010
DNA repair and recombination proteins [BR:
hay03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
C3V42_08010
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
Lon_C
RecA
AAA_22
SLFN-g3_helicase
AAA
ABC_tran
AAA_16
GvpD_P-loop
nSTAND3
NTPase_1
AAA_24
Rad51
AAA_14
PAXNEB
AAA_29
Zeta_toxin
DUF7125
Zn_ribbon_8
Viral_helicase1
zinc_ribbon_6
AAA_18
cobW
DZR
zf-RING_10
DAP3
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
AVM60561
LinkDB
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Position
1666279..1667655
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AA seq
458 aa
AA seq
DB search
MAKAPKTAYVCNDCGAEFSRWQGQCSACKAWNTITEVRLISTAKSKNDRFSGYAGETQAK
IQTLSEISLQETPRFSSGFNELDRVLGGGIVPGSAILIGGHPGAGKSTLLLQVMCGLAKN
MTALYVTGEESLQQVAMRASRLGLPNDQLKMLSETSVEQICNLADQLKPQIIVVDSIQVM
HLADIQSSPGSVAQVRECASFLTRYAKTRQVAIIMVGHVTKDGTLAGPKVLEHAIDCSLL
LEGEADSRYRTLRSHKNRFGAVNELGVFGMTEQGLREVKNPSAIFLSRGDEITSGSSVMV
LWEGTRPLLVEIQALVDHSMLANPRRVAVGLEQNRLALLLAVLHRHGGLQMADQDVFVNV
VGGVKVSETSADLALLLALISSFRNRPLPQDLVIFGEVGLAGEIRPVPSGQERISEAAKH
GFKRAIVPFGNKPKSAVENMQVFTVKKLSDALAVLDNF
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggctaaagccccgaaaacagcttatgtatgtaacgattgtggtgcggagttttctcgt
tggcaagggcaatgttcggcttgtaaagcgtggaatacaatcacggaagtgcggttaatt
tccacggctaaatccaaaaatgatcgttttagcggctacgcaggtgaaactcaggcaaaa
attcaaacgctctctgaaattagtttgcaagaaactcctcgtttttccagtggctttaat
gaattagatcgcgtactgggtggcgggatcgtaccgggcagtgcgattttaattggtggg
catcctggtgcagggaaaagtaccttgttattacaagtcatgtgtggtttagcgaaaaac
atgaccgcactttatgtgacgggagaggaatcattacaacaggttgcgatgcgtgcaagt
cgattgggattgccaaacgatcaattaaaaatgttgtcagaaacctctgtggaacagatt
tgtaatttagcggatcaattaaaaccgcaaattatagtagtggattcgatccaagtaatg
catttggcagatattcaatcctcgccgggaagtgtagctcaagtgcgtgaatgtgcttct
ttcctcactcgttatgcgaaaacccgccaagtcgccattattatggtgggacatgtaacg
aaagacggaacccttgctgggccgaaagtgttagaacatgcgattgactgttcattacta
ttagaaggcgaagccgattctcgctatcgtactttgcgtagccataaaaaccgttttggt
gcggtgaatgaattaggcgtatttggtatgaccgagcaaggtttgcgagaagtaaaaaat
ccatctgcgatctttttaagtcgaggggatgagattacatcaggcagttccgttatggta
ctttgggaaggcactcgccctcttttagttgaaattcaagccttagtggatcattcaatg
ctagcgaatcctcgtcgtgttgcggtgggattagagcaaaatcgcttagcactattattg
gcggtgttacatcgacatggtggcttacaaatggctgatcaagatgtttttgtcaatgtc
gtgggtggtgtaaaagtgagtgaaacaagtgcggatttggctttgttgttggcgttaatt
tctagtttccgtaatcgccctttgccacaagatttagtgatctttggtgaagttggatta
gcgggagaaattcgccctgtgccaagtgggcaagagcgtattagtgaagcggcaaagcat
ggctttaaacgtgcgattgttccttttggtaacaagccgaaaagtgcggtcgaaaatatg
caagtttttacggtgaagaaactttccgatgcgttagccgtgttggataatttctaa
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