Halorussus salilacus: NGM10_03400
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Entry
NGM10_03400 CDS
T09338
Name
(GenBank) PAS domain S-box protein
KO
K06930
HTH-type transcriptional regulator, bacterioopsin transcriptional activator and related proteins
Organism
hayc
Halorussus salilacus
Brite
KEGG Orthology (KO) [BR:
hayc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hayc03000
]
NGM10_03400
Transcription factors [BR:
hayc03000
]
Prokaryotic type
Helix-turn-helix
Other families
NGM10_03400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GAF_2
BAT
GAF
PAS_4
PAS
GAF_3
PAS_9
HTH_10
PAS_8
PAS_3
Diguanyl_cycl_sensor
Sigma70_r4
PAS_7
Sigma70_r4_2
HTH_20
HTH_5
GerE
Sigma70_ECF
Sigma70_r3
HTH_11
HTH_1
HTH_24
MarR_2
PAS_12
HTH_23
LacI
HTH_17
UPF0122
Motif
Other DBs
NCBI-ProteinID:
USZ68789
LinkDB
All DBs
Position
662310..665603
Genome browser
AA seq
1097 aa
AA seq
DB search
MTDAVSVVYLAPDRATAESVESLLEDERPGISLSAVTSVERVERALDALDGDPPGRVVVD
AEVVGRSDGDLVAELRDANPDVPVETVESDASGGERERALAAGIAAAATPANGDGFVEDA
HFRALAEAVSDAILVIDTDSVVRFANPAVEGVFGYAPDELVGESLTELMPEEYREPHREG
IERYLREDERRLDWESLEFPGEHRDGHEIPLGLSFSEFVREGELLFTGIVRDITQRRRRE
DELRDRVDQQRAVAEFSQRALEDRPLDELFEEAVELVAETLDHEYTKVLELTPDRDDLLL
RSGVGWDEGVVGSATVPSDEGSQAGYTLLSEEPVVVEDLDAEDRFSGPDLLTSHGVKSGV
STVIGTPGDPWGILGTHDTDRRTYADHDVQFVRSLASILATAVQRRERERDLKRYGAMVE
AVGDGVYALDSESRFLAVNDAYVSLTGYSREELVGERASTVVPESAREAVEPTQSALDPE
TVTTTETATTETAIRTADGEEVPVEARVSALPLGDGRWGQVGVVRDISDRRRREQKLTSL
HEMMGALADAEASDDIASLAVDAAVETLGFENAAVALYDDDEGRLTPAARRWREDEPIDE
ALLGTRSDDLLWRTFVDGETRVVRDLPAELDAEVSMGAALAVPLGKHGAFLAADPEPGSF
EETDVSLADILCANVESALDRAGREETLRDQRNALREKNRELERVNRLNRVIREMTRVLT
SASTDEEVMQAVCDRLAATGPYRFAWFGEPDPATGEVEPRAWAGVEEGYLDEISVTADES
PTGRGPAGRALRTGEPKAQADLLGDPPFEPWREQALKRGYRSSVSVPVTYGNTTHGVLNI
YAGEPGVFDETERSVLAELGETIGYALNAIERKEALVSERSVDLDFRVRDEDDPILSFVA
ETGARLDFENAVQRSDGLLHIFVTLSDVSPDSVASAADDISRIAEARLVADRGDETLYEV
ALGGESILAVLVDHGAIPRSMTMAGTEARFVVRVPQSADVRTIVGLFEDIYDEVELVARR
ERDEPVMTRHEFERELEDRLTDRQREVLELAYFSGFFEWPRESTAEEIAEALDVSQPTVS
RHIRGAERTLFSLIFEE
NT seq
3294 nt
NT seq
+upstream
nt +downstream
nt
atgactgacgccgttagcgtcgtctacctcgcgccggaccgcgcgaccgcggagtccgtc
gagtcgctcctcgaagacgaacgccccgggatatccctgtcggcggtcacgagcgtcgag
cgcgtcgagcgcgcgctcgacgcgctcgacggcgacccgcccggccgcgtggtcgtcgac
gccgaagtcgtcgggcggtccgacggcgacctcgtcgcggagctccgcgacgcgaacccg
gacgtaccggtcgagacggtcgagtccgacgcgtcgggcggcgagcgcgaacgcgcgctc
gccgccggaatcgcggcggccgcgacgcccgcgaacggcgacggattcgtcgaggacgcc
cacttccgcgcgctggcggaggccgtctccgacgccatcctcgtcatcgacaccgacagc
gtcgttcggttcgccaaccccgccgtcgagggcgtgttcggctacgcccccgacgaactg
gtcggcgagtcgctgaccgaactcatgcccgaggagtaccgcgagccccaccgggaggga
atcgagcggtacctccgcgaggacgagcgccgacttgactgggagtccctcgaattcccg
ggcgaacaccgcgacggccacgagattccgctgggcctgtcgttcagcgagttcgtccgc
gagggcgaactcctgttcaccggcatcgtgcgcgacatcacccagcgcaggcgtcgggag
gacgaactccgcgaccgggtcgaccaacagcgcgcggtcgcggagttctcccagcgcgcg
ctcgaagaccgaccgctcgacgaactgttcgaggaggcggtcgaactcgtcgccgagacc
ctcgaccacgagtacaccaaggtgctggaactgacccccgaccgcgatgacctcctgttg
cggagcggcgtggggtgggacgagggcgtcgtcggctcggcgaccgtccccagcgacgag
gggtcgcaggcgggctacaccctcctctcggaggagccggtggtggtcgaggacctcgac
gccgaagaccggttctcggggcccgacctgctcacctcccacggcgtgaaaagcggcgtc
agcaccgtcatcgggacccccggcgacccgtggggcatcctcggcacccacgacaccgac
cgccggacgtacgccgaccacgacgtccagttcgtccggagcctcgcctccatcctcgcc
accgccgtccagcgccgcgagcgcgagcgcgacctcaaacgctacggggcgatggtggag
gcggtcggcgacggggtctacgcgctcgattccgagtcgcggttcctcgcggtcaacgac
gcctacgtctcgctgacgggctactcccgcgaggaactggtcggcgaacgcgcctcgacg
gtcgtcccggagtcggcgcgcgaggcggtcgagccgacgcaatcggcgctcgaccccgag
accgtgacgacgaccgagaccgcgacgacggagacggcgattcggaccgccgacggcgag
gaggtccccgtcgaggcgcgcgtctcggcgctcccgctcggcgacggccggtggggacag
gtcggcgtcgtccgtgacatctccgaccgcagacgccgcgagcagaagctcacctcgctc
cacgagatgatgggggcgctggccgacgccgaagccagcgacgacatcgcgagcctcgcg
gtcgacgccgcggtcgagacgctggggttcgagaacgcggccgtggcgctctacgacgac
gacgaggggcgactcacgcccgccgcccggcggtggcgcgaggacgaacccatcgacgag
gcgctcctcgggacccggagcgacgacctgctgtggcggacgttcgtcgacggcgagacc
cgggtcgtccgggacctccccgcggaactcgacgccgaggtgtcgatgggagccgcgttg
gcggtgccgctcgggaagcacggcgcgttcctcgcggcggaccccgaaccggggtcgttc
gaggagaccgacgtctcgctcgccgacatcctgtgtgcgaacgtcgagtcggcgctcgac
cgggcgggtcgcgaggagacgctccgggaccagcgcaacgccctccgggagaagaaccga
gagctcgaacgcgtcaaccgactcaatcgggtcatccgggagatgacccgggtcctgacc
agcgcctcgaccgacgaggaggtcatgcaggcggtctgcgaccggctggccgcgaccggt
ccgtaccggttcgcgtggttcggcgagcccgaccccgcgaccggcgaggtcgagccgcga
gcgtgggccggagtcgaggaggggtacctcgacgagatatcggtcacggccgacgagtcg
ccgaccgggagaggacccgcgggccgggcgctccggaccggagagcccaaggcgcaggcc
gacctgctcggcgacccgccgttcgaaccgtggcgcgagcaggcgctcaagcgggggtac
cggtcgagcgtgtcggttccggtcacctacggcaacacgacgcacggcgtcctcaacatc
tacgcgggcgaacccggcgtgttcgacgagaccgagcggtcggtgctggcggagctcggc
gagaccatcgggtacgcgctcaacgccatcgagcgcaaggaggcgctggtgagcgagcgg
tcggtcgacctcgacttcagggtccgcgacgaggacgaccccatcctctcgttcgtggcc
gagaccggggcgcgcctcgacttcgagaacgccgtccagcgaagcgacggtctcctccac
atcttcgtcacgctcagcgacgtctcccccgattcggtggcgtcggccgccgacgacatc
tcgcggatcgcggaggcgcgactggtggccgaccgcggcgacgagaccctctacgaggtg
gcgctcggcggcgagtccatcctcgcggtgctggtcgaccacggcgcgattccccggtcg
atgaccatggcgggcacggaggcccggttcgtcgtccgggtgccacagagcgccgacgtg
cggaccatcgtggggctgttcgaggacatctacgacgaggtggaactggtcgcccggcgg
gagcgcgacgaaccggtgatgacccgccacgagttcgagcgggagctcgaggaccgactg
accgaccgccagcgcgaggtgctggagctcgcgtacttcagcggcttcttcgagtggccc
cgcgagagcaccgccgaggagatcgccgaggcgctcgacgtgtcccagcccaccgtgagc
cgccacatccggggtgccgaacggacgctgttctcgctcatcttcgaggagtag
DBGET
integrated database retrieval system
