KEGG   Halorussus salilacus: NGM10_03660
Entry
NGM10_03660       CDS       T09338                                 
Name
(GenBank) ATP-dependent DNA ligase
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
hayc  Halorussus salilacus
Pathway
hayc03030  DNA replication
hayc03410  Base excision repair
hayc03420  Nucleotide excision repair
hayc03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:hayc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    NGM10_03660
   03410 Base excision repair
    NGM10_03660
   03420 Nucleotide excision repair
    NGM10_03660
   03430 Mismatch repair
    NGM10_03660
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hayc03032]
    NGM10_03660
   03400 DNA repair and recombination proteins [BR:hayc03400]
    NGM10_03660
Enzymes [BR:hayc01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     NGM10_03660
    6.5.1.6  DNA ligase (ATP or NAD+)
     NGM10_03660
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     NGM10_03660
DNA replication proteins [BR:hayc03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    NGM10_03660
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     NGM10_03660
DNA repair and recombination proteins [BR:hayc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     NGM10_03660
   NER (nucleotide excision repair)
    Other NER factors
     NGM10_03660
   MMR (mismatch excision repair)
    Other MMR factors
     NGM10_03660
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase
Other DBs
NCBI-ProteinID: USZ68838
LinkDB
Position
complement(718997..720715)
AA seq 572 aa
MEFGEFADAAAEIEQLSADTEITERVTSLLGSATDDLPVLARFVQGRVFPAWSSETLDIG
PNYCYEAVARAAGTNVSAGDVEARLADVGDIGEVAASYEFGGQRGLAAFGSGGDDSALSV
AGVADELAALADAEGSGSRDKKIDILFGLFNRASPREARYLARLVLSEMRIGVGEGTVRD
AVASAFDVPVESVERALQVSNDYGEVARVAREEGEAGLDAMDLELGRPVQAMLAQAGTVS
DALDEWGEAAVETKYDGARVQVHHDPEGLGWAGEATADAATDGDAREVAVFSRNMEDVTD
ALPEVVEFVEAHLDVPAILDGEVVATDDDGDPLPFQEVLRRFRRKHDVARAREAVELDLF
AFDCLHAGGEDLLGAPVAQRHERLDAVLASGVADLRITDDADEIADIEADALDAGHEGIM
LKDPESTYSPGRRGKNWLKRKPAVETLDLVVTGAEWGEGRRAKFLGTFLLSARVGDAGDE
FETLGKVATGITDEELADLTELLEPHIRAQDGQEVDIRPEVVFEVGYEEIQESPTYSSGY
ALRFPRFLGVRDDKDPEDADSLERVERLAEKQ
NT seq 1719 nt   +upstreamnt  +downstreamnt
atggagttcggggagttcgccgacgccgcggccgagatcgagcagctgagcgccgacacc
gagataaccgagcgagtgacctcgctcctcgggagcgcgaccgacgacctccccgtcctc
gcgcggttcgtgcagggccgggtgtttccggcgtggtcctcggagacgctcgacatcggc
ccgaactactgctacgaggccgtcgcgcgcgccgcgggcacgaacgtctccgcgggggac
gtggaggcccgactcgccgacgtgggcgacatcggcgaggtcgccgcgagctacgagttc
ggcggccagcggggactcgcggcgttcgggtccggcggcgacgactcggccctctcggtc
gcgggggtcgccgacgaactggcggcgctggcagacgccgaggggtcggggagccgggac
aagaagatagacatcctgttcggcctgttcaaccgcgcgagcccccgcgaggcccggtac
ctcgcccggctcgtcctctcggagatgcgaatcggcgtcggcgagggcaccgtccgggac
gcggtcgcgtcggcgttcgacgtgcccgtcgagtcggtcgagcgcgccctccaggtgtcg
aacgactacggcgaggtcgcccgtgtcgcccgcgaggagggcgaggccggactcgacgcg
atggacctcgaactcggccgtcccgtccaggcgatgctcgcgcaggccgggaccgtgagc
gacgcgctcgacgagtggggcgaggcggcggtcgagacgaagtacgacggcgcgcgcgtt
caggtccaccacgaccccgagggactcggctgggctggcgaggcgaccgcagacgccgcg
accgacggcgacgcccgcgaggtcgcggtcttctcgcgcaacatggaggacgtgaccgac
gccctccccgaggtcgtcgagttcgtcgaggcgcacctcgacgtcccggccatcctcgac
ggcgaggtggtcgcgaccgacgacgacggcgaccccctgccctttcaggaggtcctcaga
cgttttcgccggaagcacgacgtggcccgcgcccgcgaggcggtcgaactcgacctgttc
gcgttcgactgcctccacgccgggggcgaggacctgctcggcgcgcccgtcgcgcaacgc
cacgagcgactggacgcggtgcttgcctccggcgtcgccgacctccggatcaccgacgac
gccgacgagatagccgacatcgaggccgacgccctcgacgcgggccacgagggaatcatg
ctcaaggaccccgagtcgacctactcgcccggccgacgcgggaagaactggctcaagcga
aagccagcagtagagacgttagacctcgtggtcacgggcgcggagtggggcgagggtcgg
cgcgcgaagttcctcgggaccttcctgctgtcggcccgcgtcggcgacgcgggcgacgag
ttcgagaccctcgggaaggtcgccaccggcatcacagacgaggagctggccgacctcacg
gaactgctcgaaccacacatccgggcccaagacggacaggaggtcgatattcgccccgag
gtcgtcttcgaggtcggctacgaggagatacaggagtcgccgacctactcgtcggggtac
gccctccggttcccgcgcttcttgggagttcgcgacgacaaggaccctgaggacgccgac
tcgctggagcgggtcgagcggttggcagagaagcagtga

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