Halorussus salilacus: NGM10_03975
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Entry
NGM10_03975 CDS
T09338
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
hayc
Halorussus salilacus
Pathway
hayc03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hayc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
NGM10_03975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hayc03021
]
NGM10_03975
Transcription machinery [BR:
hayc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
NGM10_03975
Prokaryotic type
Archaeal type
TFB
NGM10_03975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
A2L_zn_ribbon
Zn_ribbon_IS1595
Cyclin_C
Lar_restr_allev
Zn_ribbon_8
Zn_Ribbon_YjdM
Zn_ribbon_3
zf-tcix
Cas12f1-like_TNB
Zn_ribbon_PaaD
Zn_ribbon_LysW
Zn_ribbon_Top1
Sigma70_r4
Motif
Other DBs
NCBI-ProteinID:
USZ68899
LinkDB
All DBs
Position
complement(782219..783184)
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AA seq
321 aa
AA seq
DB search
MTRSTRQRERQAEAEQQDEAEEGVRECPECGSDNLVKSSDRAELVCDDCGLVVEEEQIDP
GPEWRAFNHQERQEKSRVGAPTTQTMHDKGLTTTIDWKDKDAYGRSISSKKRSQMHRLRK
WQERIRTKDAGERNLQFALSEIDRMASALGVPRSVREVASVIYRRALKEDLIRGRSIEGV
ATSALYAACRKEGIPRSLEEISEVSRVERKEIGRTYRYISQELGLEMKPVDPKKYVPRFC
SELELSEEVQTKANEIIETTAEEGLLSGKSPTGYAAAAIYAASLLCNEKKTQREVADVAQ
VTEVTIRNRYQEQIEAMGIHS
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgacacggtccactcgccagcgggagcgccaagccgaggcggagcaacaggacgaggcc
gaagagggtgtacgggagtgcccggagtgtggttccgacaacctcgtcaagagttccgac
agggcggaactcgtctgcgacgactgcggtctggtcgtcgaagaagaacagatcgacccc
ggtcctgagtggcgcgcgttcaaccaccaggaacgtcaggagaagagtcgcgtcggcgcg
ccgacgacccagacgatgcacgacaaggggctgacgactaccatcgactggaaggacaag
gacgcctacgggcggtccatctcgtcgaaaaagcggagtcagatgcaccgcctgcgcaag
tggcaggaacgcatccgcaccaaggacgcgggcgagcgcaacctccagttcgcgctcagc
gagatcgaccgcatggcctcggcgctcggcgtcccgcggtcggttcgggaggtcgcgtcg
gtcatctaccggcgcgcgctcaaggaggacctcatccggggccgctccatcgagggcgtc
gccacctccgcgctctacgccgcctgtcgaaaggagggcatcccgcgaagcctcgaagag
atctcggaggtatcacgcgtcgaacgcaaggagatcggacgaacgtatcgctacatctcc
caggaactcggtctggagatgaagccggtcgacccgaagaagtacgtcccgcggttctgt
tccgaactcgaactcagcgaagaagtccagacgaaggccaacgagataatcgagaccacc
gccgaggagggtctgctctcgggcaagtccccgaccggctacgccgccgccgccatctac
gcggcgtcactgctctgtaacgagaagaagacccagcgcgaggtcgccgacgtcgcgcag
gtcaccgaggtcacaatccggaaccggtatcaagagcagatcgaagcgatgggcatccac
agctaa
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integrated database retrieval system
