Halorussus salilacus: NGM10_05045
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Entry
NGM10_05045 CDS
T09338
Name
(GenBank) transcription elongation factor Spt5
KO
K15172
transcription elongation factor SPT5
Organism
hayc
Halorussus salilacus
Pathway
hayc03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
hayc00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
NGM10_05045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hayc03021
]
NGM10_05045
03019 Messenger RNA biogenesis [BR:
hayc03019
]
NGM10_05045
Transcription machinery [BR:
hayc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
NGM10_05045
RNA polymerase I system
NGM10_05045
Messenger RNA biogenesis [BR:
hayc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
NGM10_05045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt5-NGN
KOW
DUF6093
Ribosomal_uL24m-like
KOW4_SPT5
SH3_KIN17_C
KOW2_Spt5
Motif
Other DBs
NCBI-ProteinID:
USZ69105
LinkDB
All DBs
Position
complement(987698..988135)
Genome browser
AA seq
145 aa
AA seq
DB search
MPMYAVKTTASQERTVADMIINREEPEIHAALAPDSLTSYVMVEADNNAVISRVLEEIPH
ARNIVPGESSISEVEHFLSPTPDVEGIAEGDIVELIAGPFKGEKAQVQRIDEGKDQVTVE
LYEATVPIPVTVRGDQIRVLDSEER
NT seq
438 nt
NT seq
+upstream
nt +downstream
nt
atgccaatgtacgcagtcaagacgaccgcgagtcaggagcgcaccgtcgcggacatgata
atcaaccgcgaggagcccgagattcacgccgcgctcgcgcccgactcgctgacgagctac
gtgatggtcgaggccgacaacaacgccgtcatcagccgcgtcctcgaagagattccccac
gcccgcaacatcgttccgggcgagagcagtatctctgaggtcgagcacttcctgtcgccg
acccccgacgtggagggcatcgcggagggcgacatcgtggaactcatcgccggaccgttc
aagggcgagaaggcgcaggtccagcgcatcgacgagggcaaagaccaggtgacggtcgag
ctgtacgaggcgacggtcccgattccggtgacggtccggggcgaccagattcgggtgctg
gactccgaagagcggtaa
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