Halorussus salilacus: NGM10_06440
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Entry
NGM10_06440 CDS
T09338
Name
(GenBank) DNA-directed RNA polymerase subunit A'
KO
K03041
DNA-directed RNA polymerase subunit A' [EC:
2.7.7.6
]
Organism
hayc
Halorussus salilacus
Pathway
hayc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hayc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NGM10_06440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hayc03021
]
NGM10_06440
Enzymes [BR:
hayc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NGM10_06440
Transcription machinery [BR:
hayc03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
NGM10_06440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_4
RNA_pol_Rpb1_3
RNA_pol_Rpb1_5
HTH_3
Motif
Other DBs
NCBI-ProteinID:
USZ69370
LinkDB
All DBs
Position
complement(1255525..1258458)
Genome browser
AA seq
977 aa
AA seq
DB search
MSTGQTPKEIGKLSFGLMDPEEYREMSATKIITADTYDDDGFPIDMGLMDPRLGVIDPGL
ECKTCGKHSGSCNGHFGHIELAAPVIHVGFTKLIRRLLRGTCRNCSRLLLTEDEQEKYES
KLDRTRELGNDLTDVTKAAIREARKKDRCPYCGEVQYDINHEKPTTYYEVQQVLTSEYSE
QIAAAMQGRSGDDEDDEEREPIAPQELADQTGIDLSRINEIMSGEFRPRESDRKALEKAL
DIDLTEEDMNKLMPSDIRDWFEDIPDEDIETLGINSERSRPEWMILTVLPVPPVTARPSI
TLDNGQRSEDDLTHKLVDIIRINQRFMENREAGAPQLIIEDLWELLQYHVTTFMDNEISG
TPPARHRSGRPLKTLSQRLKGKEGRFRGSLSGKRVNFSARTVISPDPTLSLNEVGVPERV
AREMTQTMNVTERNVEDARRYVANGPEGHPGANYVKRPDGRRLKVTEKNCEELATKVEAG
WEVNRHMVDGDIVIFNRQPSLHRMSIMAHEVVVMPYKTFRLNTVVCPPYNADFDGDEMNM
HALQNEEARAEARVLMRVQEQILSPRFGENIIGAIQDHISGTYLLTNENPHFNETQALDL
LRATRIDELPEPSGHDDDDSEPYWTGRDIFSELLPENMNLEFTGTVGDDVIIEDGQLVEG
TIAEDEVGEFGGDIVDTICKVYGNTRARIFINEVAALAMRSIMHFGFSIGIDDESIPAEA
QNRIDEAIDNAYDRVEELIETYQNGDLESLPGRTVDETLEMKIMQTLGKARDSAGDIAED
HFADDNPAVVMAESGARGSMLNLTQMAGCVGQQAVRGERINRGYEDRTLSHYKPDDLSAE
AHGFVEHSYTGGLNPREFFFHAMGGREGLVDTAVRTSKSGYLQRRLINALSELETQYDGT
VRDTSDTIVQFEFGEDGTSPVQVSSKEDHDIDVDRIADRVLDEEFDDEARKKEFLGEKRP
PTNLSEHADARQVEGDD
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacaggacaaacacccaaggagatcgggaagctcagcttcgggctgatggacccc
gaggagtaccgcgagatgtcggcgacgaagataatcacggccgacacctacgacgacgac
gggttccccatcgacatggggctgatggacccgcggctcggcgtcatcgaccccgggctg
gagtgcaagacctgcggcaagcactccgggtcgtgcaacggccacttcggccacatcgag
ctcgccgcgcccgtcatccacgtcgggttcacgaagctcatccggcggctcctgcgcggg
acctgccggaactgctcgcggctcctgctcaccgaggacgagcaggagaagtacgagtcc
aagctcgaccggacccgcgagctcggtaacgacctcaccgacgtgaccaaggccgccatc
cgggaggcccgcaagaaggaccggtgtccctactgcggcgaggtccagtacgacatcaac
cacgagaagcccaccacctactacgaggtccagcaggtcctcaccagcgagtactccgag
cagatcgcggccgcgatgcagggcaggtccggcgacgacgaggacgacgaggagcgcgaa
cccatcgcgccccaggagctcgccgaccagaccggcatcgacctctcgcgaatcaacgag
atcatgtcgggcgagttccggccccgcgagtccgaccggaaggccctcgaaaaggcgctc
gacatcgacctcaccgaggaggacatgaacaagctgatgccaagcgacatccgggactgg
ttcgaggacatcccggacgaggacatcgagacgctgggcatcaactccgagcgctcccgg
cccgagtggatgatcctgacggtcctgccggtgccgccggtcacggcccgaccctccatc
acgctcgacaacggccagcgctcggaggacgacctcactcacaagctggtcgacatcatc
cgcatcaatcagcggttcatggagaatcgcgaggccggagcgccccagctcatcatcgag
gacctctgggaactcctccagtaccacgtcaccacgttcatggacaacgagatatcgggc
acgccgcccgcccgccaccgctccggtcggcccctcaagaccctcagccagcgcctgaag
ggcaaggagggccggttccgcgggagcctgtctggcaagcgcgtgaacttctcggcccgg
acggtcatctcgcccgacccgactctctcgctcaacgaggtcggggtccccgagcgcgtc
gcccgggagatgacccagacgatgaacgtcaccgagcgcaacgtcgaggacgcccgccgg
tacgtcgccaacggccccgagggccatccgggcgcgaactacgtcaagcgtcccgacggt
cgtcgcctcaaggtgaccgagaagaactgcgaggaactcgcgaccaaggtcgaggccggg
tgggaggtcaaccgccacatggtcgacggcgacatcgtcatcttcaaccgccagccgtcg
ctgcaccggatgtccatcatggcccacgaggtcgtggtgatgccgtacaagaccttccgg
ctgaacaccgtggtctgcccgccgtacaacgccgacttcgacggcgacgagatgaacatg
cacgccctccagaacgaggaggcccgcgcagaggcgcgcgtgctcatgcgcgtgcaggaa
caaatcctgagcccgcgcttcggcgagaacatcatcggcgcgattcaggaccacatctcg
ggcacctacctgctcaccaacgagaacccccacttcaacgagacgcaggcgctcgacctc
ctgcgagcgacccgcatcgacgagcttccggaaccgtcgggccacgacgacgacgacagc
gagccctactggaccggccgagacatcttctcggaactgctcccggagaacatgaacctc
gaattcacgggcaccgtcggcgacgacgtcatcatcgaggacggccagctcgtcgagggc
accatcgccgaggacgaggtcggggagttcggcggcgacatcgtcgacaccatctgcaag
gtgtacggtaacacccgcgcccgcatcttcatcaacgaggtcgcggcgctggcgatgcgc
tcgatcatgcacttcgggttctccatcggcatcgacgacgagtccatcccggcggaggcc
cagaaccgcatcgacgaggccatcgacaacgcctacgaccgcgtcgaggaactcatcgag
acctaccagaacggcgacctcgaatccctgcccggccggacggtcgacgagactctggag
atgaagatcatgcagacgctcggcaaggcccgggactccgcgggcgacatcgccgaggac
cacttcgccgacgacaaccccgcggtcgtgatggccgagtccggcgcgcgtgggtcgatg
ctcaacctcacccagatggctggctgtgtcggccagcaggcggttcggggcgagcgcatc
aaccgggggtacgaggaccgcacgctgagccactacaagcccgacgacctctcggcggag
gcccacggcttcgtggaacactcctacacgggcgggctcaacccccgtgagttcttcttc
cacgcgatgggcggccgcgaggggctggtcgacaccgcggtccggacctccaagtccggc
tacctccagcgccgtctcatcaacgcgctctccgagctcgaaacccagtacgacggcacg
gttcgggacacctccgacaccatcgtccagttcgagttcggcgaggacggcaccagcccg
gtgcaggtctcctcgaaggaggaccacgacatcgacgtcgaccgaatcgcagaccgcgtc
ctcgacgaggagttcgacgacgaggcgcgcaagaaggagttcctcggcgagaagcgcccg
ccgaccaacctctcggagcatgcggacgcccgacaggtcgagggagacgactga
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