Halorussus salilacus: NGM10_07280
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Entry
NGM10_07280 CDS
T09338
Name
(GenBank) single-stranded DNA binding protein
KO
K07466
replication factor A1
Organism
hayc
Halorussus salilacus
Pathway
hayc03030
DNA replication
hayc03420
Nucleotide excision repair
hayc03430
Mismatch repair
hayc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hayc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NGM10_07280
03420 Nucleotide excision repair
NGM10_07280
03430 Mismatch repair
NGM10_07280
03440 Homologous recombination
NGM10_07280
03460 Fanconi anemia pathway
NGM10_07280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hayc03000
]
NGM10_07280
03032 DNA replication proteins [BR:
hayc03032
]
NGM10_07280
03400 DNA repair and recombination proteins [BR:
hayc03400
]
NGM10_07280
Transcription factors [BR:
hayc03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
NGM10_07280
DNA replication proteins [BR:
hayc03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
NGM10_07280
DNA repair and recombination proteins [BR:
hayc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
NGM10_07280
MMR (mismatch excision repair)
NGM10_07280
DSBR (double strand breaks repair)
HR (homologous recombination)
NGM10_07280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_anti-codon
REPA_OB_2
CDC24_OB3
OB_Ssb-like
SSB
SHLD2_OB1
Motif
Other DBs
NCBI-ProteinID:
USZ69527
LinkDB
All DBs
Position
complement(1415330..1416787)
Genome browser
AA seq
485 aa
AA seq
DB search
MGAIEDVHADLDAEVSLEEFREAVEEKVAQMGGLADEETAAMLIAHELDEEGGEVDSVAD
VEPGMEEVKFLAKVVGIGDVRTFERDDDEREDGRVLNVEVADETGSIRITFWDKQADAAE
EELEVGEDLRIAGRPKEGYNGVEVNVDKAEPDDEADIDIQIRDTYRVEDLSLGLSDVNLR
GKVLDTDSIRTFSRDDGSEGKVSNLKVGDPTGRVRVTLWDEKADRADELDAGVSVEVVDG
YVRERDGDLELHVGNRGAVEEIEEDIEYVPETADIADLDIGDQVDIGGVVRSTDPKRTFD
RDDGSEGQVRNIRVQDETGDLRVALWGEKADTEVAPGDEVQLADVEIQDGWEDDIEGSAG
WQSTVTVLGEADAPAGGTRSGGSSADAETGTTGLDSFGGDGDSAAGDAGSADAGGASANG
ASADEADAAEFVEFTGTVVQAGDPIILDDGEQTVSVEASADVTLGEKVTARGQLRDGTLD
AEDVF
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgggcgcgatagaggacgttcacgccgacctcgacgctgaggtctccctggaggaattc
cgcgaggcggtcgaggagaaagtcgcacagatgggcgggctggccgacgaggagacggcc
gcgatgctcatcgcccacgagctcgacgaggaagggggcgaggtcgacagcgtcgccgac
gtcgaacccggcatggaggaggtcaagttcctcgcgaaggtcgtcggcatcggcgacgtg
cggaccttcgagcgcgacgacgacgagcgcgaggacggccgcgtgctcaacgtcgaggtc
gccgacgagaccggctccatccgcatcaccttctgggacaagcaggccgacgccgccgag
gaggaactcgaagtcggcgaggacctccgcatcgcgggccgacccaaggaggggtacaac
ggcgtcgaggtcaacgtcgacaaggccgaacccgacgacgaggccgacatcgacatccag
attcgagacacctaccgggtcgaggacctctcgctggggctctcggacgtgaacctccgc
gggaaggtgctcgacaccgactccatccggacgttctcgcgcgacgacggctcggagggg
aaggtctcgaacctcaaggtgggcgaccccacgggtcgggtccgggtcaccctctgggac
gagaaggccgaccgcgccgacgaactcgacgccggggtctccgtggaggtcgtcgacggc
tacgtccgcgagcgcgacggcgacctcgaactccacgtcggcaaccgcggcgcggtcgag
gagatcgaggaggacatcgagtacgtccccgagaccgccgacatcgccgacctcgacatc
ggcgatcaggtcgacatcggcggcgtcgtgcgctctaccgaccccaagcgcaccttcgac
cgcgacgacggctcggaggggcaggtccggaacatccgggttcaggacgagaccggcgac
ctccgggtcgcgctctggggcgagaaggccgacaccgaggtcgcaccgggcgacgaggtc
cagttggccgacgtcgagattcaggacggctgggaggacgacatcgagggctcggctggc
tggcagtccaccgtgacggtcctcggcgaggccgacgcgcccgcgggcggaactcggagc
ggcggttcgagcgccgacgccgagaccggtaccaccggcctcgactcgttcggcggcgac
ggagactcggcggcgggtgacgccgggagcgccgacgccggtggtgcgagcgcgaacggc
gcgagcgccgacgaggccgacgccgccgagttcgtggagttcacgggaaccgtcgtccag
gcgggcgaccccatcatcctcgacgacggcgagcagacggtcagcgtcgaggcgagcgca
gacgtgaccctcggcgagaaggtcaccgcgcgcggccagctccgcgacggcaccctcgac
gcagaagacgtgttctga
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integrated database retrieval system
