KEGG   Halorussus salilacus: NGM10_14565
Entry
NGM10_14565       CDS       T09338                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
hayc  Halorussus salilacus
Pathway
hayc03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:hayc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    NGM10_14565
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hayc03019]
    NGM10_14565
Messenger RNA biogenesis [BR:hayc03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     NGM10_14565
SSDB
Motif
Pfam: RNase_J_b_CASP Lactamase_B_2 Lactamase_B RMMBL
Other DBs
NCBI-ProteinID: USZ67943
LinkDB
Position
2822103..2823455
AA seq 450 aa
MEIEIATIGGYEEVGRQCTAVRAGDDVVIFDMGLNLSKVLLHDNVETEKLHSLDLIDMGA
IPDDRVMSDLEGDVQAIVPTHGHLDHIGAISKLAHRYNAPVVASPFTIELVKQQIQGEQK
FGVENDLVKMEAGETMSIGDSGQVELEFVNVTHSIIDAINPVLHTPEGAIVYGLDKRMDH
TPVIGDPIDMKRFREIGREGEGVLCYIEDCTNAGRKGRTPSEAVARRHLQDVMTSVEDYD
GGIVATTFSSHIARVKSLVEFAKDIGREPVLLGRSMEKYSGTAERLDFVDFPEDMGMFGH
RKSVDRTFKRIMKEGKEDYLPIVTGHQGEPRAMLTRMGRGETPYELDDGDKVIFSARVIP
EPTNEGQRYQSERLLKMQGARIYDDVHVSGHLREEGHYTMLDALQPQHVIPAHQDMKGFS
PYVSLCENQGYKLGRDVHVTSNGNLIQLVE
NT seq 1353 nt   +upstreamnt  +downstreamnt
atggaaatagaaattgcaaccatcggcggttacgaagaagtcggacggcagtgtactgcc
gtgcgcgcgggcgacgacgtggtcatattcgacatggggctgaacctctcgaaggtcctc
ctccacgacaacgtcgagaccgagaaactgcacagcctcgacctcatcgacatgggcgcg
attccggacgaccgcgtcatgagcgacctcgaaggcgacgtgcaggccatcgtgcccacg
cacggccacctcgaccacatcggggccatctcgaagctggcccaccggtacaacgcgccg
gtcgtcgcctcgccgttcaccatcgaactggtgaaacaacagattcagggcgagcagaag
ttcggcgtcgagaacgacctcgtgaagatggaggctggcgagacgatgtccatcggcgac
tccgggcaggtcgaactggagttcgtcaacgtgacccactccatcatcgacgccatcaac
ccggtgctccacacgcccgagggggccatcgtctacggtctcgacaagcggatggaccac
acgccggtcatcggcgaccccatcgacatgaagcggttccgcgagatcggccgcgagggc
gagggcgtcctctgctacatcgaggactgcaccaacgcgggccggaagggccgcaccccg
agcgaggcggtggcccgccgccacctccaagacgtgatgacctcggtcgaggactacgac
ggcggcatcgtggcgacgacgttctccagccacatcgcccgcgtcaagagcctcgtggag
ttcgccaaggacatcgggcgcgaacccgtcctgctcggacggtcgatggagaagtactcg
ggcaccgccgagcgactcgacttcgtcgacttccccgaggacatggggatgttcggccac
cgcaagtccgtggaccgcaccttcaagcgcatcatgaaggagggcaaggaggactacctc
cccatcgtcaccggccaccagggcgaaccgcgcgcgatgctcacccggatgggtcggggc
gagacgccctacgaactggacgacggcgacaaggtcatcttctcggcccgcgtgattccg
gagccgaccaacgagggccagcgctaccagtccgagcgcctcctgaagatgcagggcgcg
cgcatctacgacgacgtccacgtctcgggccacctccgcgaggagggccactacacgatg
ctggacgcgctccagccccagcacgtcatccccgcccaccaggacatgaaggggttctcg
ccctacgtgagcctgtgcgagaaccaggggtacaagctcggtcgagacgtgcacgtcacg
agcaacggcaacctcatccaactcgtcgaataa

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