Halorussus salilacus: NGM10_14565
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Entry
NGM10_14565 CDS
T09338
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
hayc
Halorussus salilacus
Pathway
hayc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hayc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NGM10_14565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hayc03019
]
NGM10_14565
Messenger RNA biogenesis [BR:
hayc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
NGM10_14565
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GFIT
Motif
Pfam:
RNase_J_b_CASP
Lactamase_B_2
Lactamase_B
RMMBL
Motif
Other DBs
NCBI-ProteinID:
USZ67943
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Position
2822103..2823455
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AA seq
450 aa
AA seq
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MEIEIATIGGYEEVGRQCTAVRAGDDVVIFDMGLNLSKVLLHDNVETEKLHSLDLIDMGA
IPDDRVMSDLEGDVQAIVPTHGHLDHIGAISKLAHRYNAPVVASPFTIELVKQQIQGEQK
FGVENDLVKMEAGETMSIGDSGQVELEFVNVTHSIIDAINPVLHTPEGAIVYGLDKRMDH
TPVIGDPIDMKRFREIGREGEGVLCYIEDCTNAGRKGRTPSEAVARRHLQDVMTSVEDYD
GGIVATTFSSHIARVKSLVEFAKDIGREPVLLGRSMEKYSGTAERLDFVDFPEDMGMFGH
RKSVDRTFKRIMKEGKEDYLPIVTGHQGEPRAMLTRMGRGETPYELDDGDKVIFSARVIP
EPTNEGQRYQSERLLKMQGARIYDDVHVSGHLREEGHYTMLDALQPQHVIPAHQDMKGFS
PYVSLCENQGYKLGRDVHVTSNGNLIQLVE
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atggaaatagaaattgcaaccatcggcggttacgaagaagtcggacggcagtgtactgcc
gtgcgcgcgggcgacgacgtggtcatattcgacatggggctgaacctctcgaaggtcctc
ctccacgacaacgtcgagaccgagaaactgcacagcctcgacctcatcgacatgggcgcg
attccggacgaccgcgtcatgagcgacctcgaaggcgacgtgcaggccatcgtgcccacg
cacggccacctcgaccacatcggggccatctcgaagctggcccaccggtacaacgcgccg
gtcgtcgcctcgccgttcaccatcgaactggtgaaacaacagattcagggcgagcagaag
ttcggcgtcgagaacgacctcgtgaagatggaggctggcgagacgatgtccatcggcgac
tccgggcaggtcgaactggagttcgtcaacgtgacccactccatcatcgacgccatcaac
ccggtgctccacacgcccgagggggccatcgtctacggtctcgacaagcggatggaccac
acgccggtcatcggcgaccccatcgacatgaagcggttccgcgagatcggccgcgagggc
gagggcgtcctctgctacatcgaggactgcaccaacgcgggccggaagggccgcaccccg
agcgaggcggtggcccgccgccacctccaagacgtgatgacctcggtcgaggactacgac
ggcggcatcgtggcgacgacgttctccagccacatcgcccgcgtcaagagcctcgtggag
ttcgccaaggacatcgggcgcgaacccgtcctgctcggacggtcgatggagaagtactcg
ggcaccgccgagcgactcgacttcgtcgacttccccgaggacatggggatgttcggccac
cgcaagtccgtggaccgcaccttcaagcgcatcatgaaggagggcaaggaggactacctc
cccatcgtcaccggccaccagggcgaaccgcgcgcgatgctcacccggatgggtcggggc
gagacgccctacgaactggacgacggcgacaaggtcatcttctcggcccgcgtgattccg
gagccgaccaacgagggccagcgctaccagtccgagcgcctcctgaagatgcagggcgcg
cgcatctacgacgacgtccacgtctcgggccacctccgcgaggagggccactacacgatg
ctggacgcgctccagccccagcacgtcatccccgcccaccaggacatgaaggggttctcg
ccctacgtgagcctgtgcgagaaccaggggtacaagctcggtcgagacgtgcacgtcacg
agcaacggcaacctcatccaactcgtcgaataa
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