Halothiobacillus diazotrophicus: A9404_05260
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Entry
A9404_05260 CDS
T04441
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
haz
Halothiobacillus diazotrophicus
Pathway
haz03030
DNA replication
haz03430
Mismatch repair
haz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
haz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
A9404_05260
03430 Mismatch repair
A9404_05260
03440 Homologous recombination
A9404_05260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
haz03032
]
A9404_05260
03400 DNA repair and recombination proteins [BR:
haz03400
]
A9404_05260
Enzymes [BR:
haz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
A9404_05260
DNA replication proteins [BR:
haz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
A9404_05260
DNA repair and recombination proteins [BR:
haz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
A9404_05260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
HHH_3
DUF655
Motif
Other DBs
NCBI-ProteinID:
ANJ66861
UniProt:
A0A191ZG50
LinkDB
All DBs
Position
1190074..1193598
Genome browser
AA seq
1174 aa
AA seq
DB search
MSFVHLHTHSEFSLVDSTLRIKPMLAAARDRGMPALALTDQGNLFAMVKFYQGAIKAGIK
PILGADCWLADDKQQVSSRVVLLAQNNDGFRHLTELLSQGYCEGQIDGRPTLKREWLTVA
QCEGLIALSCSMGGGVGGPIGQRLLQGKPADLEAELAFWLERFPNRFYLELTRTGRQDEE
TYLHAAVELAQARNLPVVATNDVRFMDADDFEAHELRVCIHDGRTLDDPRRPRLYSPQQY
LRSAEEMQSLFADIPEALANSVAIAERCNVTLRLGKNFLPNFPTPNGESEAEYLRTLSEQ
GLAYRFERVPEEQHAEYRARLNIELDVIIQMGFPGYFLIVADFIQWAKRQSIPVGPGRGS
GAGSLVAWALLITDIDPIPYDLLFERFLNPERVSMPDFDIDFCMEGRDRVIEYVAERYGR
AAVSQIATHGTMAAKAVVRDVGRVMGYPYGFVDRIAKLIPMKPGLDVTLEDALGRTERSQ
KEAERFSAEFRDLYERDEEVQAIVDMGMALEGLPRNVGKHAGGVVIAPSKLTDFTPMYCE
ANGASAASQLDKDDVEAVGLVKFDFLGLRNLTIIDWALTAINAEQKARGAPPVDISAIPL
DDPASFQLLKRCETTAVFQLESRGMKDLIRRLQPDTFEDIIALVALFRPGPLQSGMVDDF
ILRKKGEQRIEYLHPWLTEVLTPTYGVIVYQEQVMQIAQILAGYTLGGADLLRRAMGKKK
PEEMAKQRAIFLEGAKSKEVDPDQAGHIFDLMEKFAGYGFNKSHSAAYALVAYQTAWLKA
HYPAHFMAAVLSADMDNTDKIVGLIGECQRMNLQVVPPDVNRCAYKFQAADAGTIIYGLG
AIKGVGEGVIQQIVHERQRGGPFRDMNDFCQRVGTQALNKRVLEAMVLAGALDQLGPNRA
SLFAHIPEAMKATNQLQSAQEAGMGDLFGGLDTPETAIAVPIRTLDPWPDTEQLKQEKNT
LGLYLTGHPINAFKAELAKIVSDSLADLGERLDAPAPGTFSRGEPVTVAGLCVAERVVRQ
QNGDRQLFITLDDGGGRCEVRITGDDIDALAPWIGMDQLVIVEGDATFDNFSGGVRVRCK
RLMPLEQARCERARSLMIRLAPDAGETEIDSLLDVLQKHRAEADGVPVHCLVQSPLARAV
VRLGPSWQVPPTDPILNDLGERPGVDEVQVLYRR
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgagttttgtccatctccatacccacagcgaattttccctggtcgacagcaccctgcgc
atcaagcccatgctggccgccgcccgcgatcgcggcatgccggccctggcgctcaccgat
cagggcaatctcttcgcgatggtgaagttctaccagggggcgatcaaggcagggatcaaa
ccgattctgggcgcggattgctggttggccgacgacaaacagcaggtatcgagccgggtc
gtcctcctcgcacagaacaacgacggattccggcatctcactgaactcctttcccagggt
tactgcgagggacagatcgacgggcgccccaccctcaagcgcgaatggctgacggtggcc
cagtgcgagggcctgatcgccctgagctgcagcatgggcggcggcgtgggcggccccatt
ggacaacgcctgctccagggcaaacccgccgatctcgaggccgaactggctttctggctg
gaacggtttccgaatcgcttctatctggaattgacccgaaccggtcggcaggacgaggaa
acctacctgcatgccgccgtcgaactggcacaggcgcgaaatctgcccgttgtggccacc
aacgacgtccgtttcatggatgccgacgatttcgaggcccatgaactgcgggtgtgcatc
cacgacggacggacgctggacgatccgcgtcggccgcgcctgtattccccgcagcaatac
ctgcgctccgccgaggagatgcagtccctgttcgccgacattcccgaggccctcgccaac
agcgtggccatcgccgaacgctgcaacgttaccctgcggctgggcaagaacttcctgccg
aacttccccacgcccaacggcgagagcgaagccgaatatctgcggacactgagcgagcag
ggtctggcctaccgtttcgagcgggtacccgaagagcagcatgccgaataccgggcgcga
ctgaacatcgagctggacgtgatcattcagatgggcttccccggctacttcctgatcgtc
gcagacttcatccagtgggcgaagcgccagtcgattccggtcggcccgggccggggctcc
ggtgcgggttcgctggtcgcctgggcactcctgatcacggacatcgatccgatcccctac
gacctgctgttcgaacgcttcctgaatcccgagcgggtctcgatgcccgacttcgacatc
gacttctgcatggaaggccgcgaccgggtcatcgaatacgtggccgaacgctatggccgc
gcggcggtttcgcagatcgccacccacggaaccatggcggccaaggctgtcgtgcgcgat
gtgggccgggtcatgggctatccctacggcttcgtcgaccgcatcgccaagctgattccg
atgaaaccggggctggacgtcaccctggaggacgccctcggtcggacggagcgctcgcag
aaggaagccgaacgcttctcggccgaattccgtgatctgtacgaacgcgacgaggaagtc
caggccatcgtggacatgggcatggcgctcgagggcctgccgcggaacgtcggcaagcac
gcaggcggcgtggtgatcgcgcccagcaagctgaccgacttcacgccgatgtactgcgaa
gccaacggcgcctcggcggcctcccagctcgacaaggacgacgtcgaggccgtgggtctc
gtcaagttcgacttcctgggtctgcgcaatctcacgatcatcgactgggcactgaccgcc
atcaatgcggaacagaaagcacgcggcgccccccccgtcgacatctccgccattcccctg
gacgatccggccagcttccagctgctcaagcgctgcgaaaccaccgccgtcttccagctc
gaatcccgcggcatgaaggatctgatccgtcgcctgcagccggataccttcgaagacatc
atcgccctcgtcgccctgttccgtcccggcccgttgcagtcgggcatggtggacgacttc
atcctgcgcaagaaaggcgagcagcggattgaatacctccatccctggctgaccgaggtc
ctgacacctacctatggggtcatcgtctaccaggaacaggtgatgcagatcgcccagatc
ctggcgggctacacgctgggtggcgccgacctgctgcggcgtgccatgggcaagaagaag
ccggaggaaatggccaagcaacgggccattttcctcgagggcgcgaagagcaaggaagtc
gacccggatcaggccggccacatcttcgacctgatggagaaattcgccggctacggcttc
aacaagtcgcactctgccgcctatgcgctcgtcgcctaccagaccgcctggctcaaggcg
cactacccggcccatttcatggccgccgtgctctccgccgatatggacaacacggacaag
atcgtcggcctgatcggcgagtgccaacgcatgaatcttcaagtcgtaccgccggacgta
aaccgctgcgcctacaagttccaggccgccgacgccggcacgatcatctatggtcttggc
gccatcaagggcgtgggtgaaggcgtgatccagcagatcgtccacgaacggcaacgcggc
ggcccgttccgggacatgaacgatttctgccagcgcgtgggcacccaggcgctcaacaag
cgcgtactggaagccatggtgctcgccggagcgctggatcagctcggcccgaaccgagcc
agcctgttcgcgcatatccccgaggccatgaaggcgaccaaccagctgcaaagcgcgcag
gaagcgggcatgggcgacctgttcggcgggctcgacaccccggaaacggccatcgccgtt
cccattcggaccctcgacccctggcccgataccgaacagctgaaacaggaaaagaatacg
ctggggctttatctgaccggccaccccatcaacgccttcaaggccgaactggccaagatc
gtctccgattcgctggccgacctcggcgaacggctggatgcccccgcccccggcaccttc
agtcgcggcgaacccgtcaccgtagccggcctgtgcgttgccgagcgcgtcgtccgccag
cagaacggcgaccgtcagctcttcatcacgctggacgacggtggcgggcgctgcgaggta
cgcattaccggcgacgacatcgacgcgctggcaccctggatcggcatggatcagctcgtg
atcgtggagggcgatgcgactttcgacaatttcagcggcggcgtccgcgtacgttgcaag
cgtctgatgccgctggagcaggcccgatgcgagcgggcgcgcagcctgatgatccgactg
gcgcccgacgccggggaaacggagatcgacagtctgctcgacgtgctccagaagcaccgg
gcggaagctgacggcgtgccggtgcattgcctcgtgcaatcaccgctggcacgcgccgtg
gtccggctcggtccctcttggcaggtcccgccgacggacccgatactgaacgacctgggc
gagagacccggcgtcgatgaagtacaggttctgtaccggcgctga
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