Halothiobacillus diazotrophicus: A9404_10530
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Entry
A9404_10530 CDS
T04441
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
haz
Halothiobacillus diazotrophicus
Pathway
haz03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
haz00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
A9404_10530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
haz03021
]
A9404_10530
03400 DNA repair and recombination proteins [BR:
haz03400
]
A9404_10530
Enzymes [BR:
haz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
A9404_10530
Transcription machinery [BR:
haz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
A9404_10530
DNA repair and recombination proteins [BR:
haz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
A9404_10530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Peptidase_M23
BSH_YknX
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
ANJ67750
UniProt:
A0A191ZIQ1
LinkDB
All DBs
Position
2380421..2384629
Genome browser
AA seq
1402 aa
AA seq
DB search
MKELLNLMNREVTDEDFDGIRISLASPEMIRSWSYGEVKKPETINYRTFKPERDGLFCAK
IFGPVRDYECLCGKYKRLKHRGVVCEKCGVEVTLSKVRRERMGHIELACPVAHIWYLKSL
PSRIGLLLDMTLRDIERVLYFEAFIITDPGMTPLNKGDLLTDEMYIDALEQYGDEFEADM
GAEAIQKLLKDIDLDQQILGLRDELAETGSETKIKRISKRLKLLEAFKESGNRPEWMVLT
QLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLEINAPDIILRNEKRMLQ
ESVDSLLDNGRRGRAVTGTNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVIVVGPA
LRLHQCGLPKKMALELFKPFIFGKLHRRGLATTIKAAKKLVEREGPEVWDVLEEVIREHP
VLLNRAPTLHRLGIQAFEPILIEGKAIQLHPLVCSAYNADFDGDQMAVHVPLSLEAQAEA
RALMMSTNNVLSPANGDPVIVPSQDIVLGIYYMTRSKINGRGEGMVFADLDEVQRAYDNH
QVELGAQIKVRVNDWVRFDDGTAEAKRHIVETTVGRALLYRTLPQGVPFEQINKDMGKKA
ISALLNYIYRKLGLKDTVLFADQLMYTGFRYATRSGISICSDDMLVPPSKPTELAKAESE
VKEIQDQYAQGLVTEKERYNKVVDIWSRANDAISRAMMEQLGSEQVVNREGETVKQSSFN
AIFMMADSGARGSAAQIRQLAGMRGLMSKPDGSIIETPITANFREGLNVLQYFISTHGAR
KGLADTALKTANSGYLTRRLVDVAQDLVITMDDCGTTAPGIKVTAVIEGGDVVQGIGARI
LGRTTSQDVLMPGSDEVLVPANTVINEFMVSRIEDSGVDEVWVRSTISCEARHGICAMCY
GRDLARGNVVNIGESVGVMAAQSIGEPGTQLTMRTFHIGGAASRSAAASSVQNKQPGTVR
LHNLKTVVNRDNDLVAVTRSGELGMVDDQGRERERYKVPYGAVIRVKEGDKIAQGTTLAT
WDPHTHPVVSEMKGQARFSDFVDGLSVKSETDEITGLTSQVVIDPKHRSSSAAKDLRPAI
ALVDDDGQPICLVGTDIPAFYVLPAEAIIGIEDGATVQVGDVIARIPQESSKTRDITGGL
PRVADLFEARKPKEPAILAEYTGTISFGKETKGKQRLVITDEHGEAHEELIPKYRVINVF
EGEHVARGEVIADGELTPHDILRLRGVPDLAAYIIKEIQDVYRLQGVMINDKHIEVIVRQ
MLRKVEITEPGDSGYLRGDQVDKARLLEENRQLEQAGKFPAKYEPMLLGITKASLVTESF
ISAASFQETTRVLTDSSTRGARDELRGLKENVIVGRLIPAGTGLAHHQDRRRRRNSTLES
ANALFMDADAQDAGVDEGESVA
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaattgctcaatctgatgaatcgcgaagtgaccgacgaagatttcgatggtatt
cgtatctcgttggcatccccggaaatgatccgctcatggtcgtatggcgaggtcaagaag
ccggagaccatcaattaccggaccttcaagcccgagcgggatggtctgttctgcgcgaag
atcttcggtcccgtgcgggactacgaatgcttgtgcggcaagtacaagcgtctgaagcac
cgtggtgtcgtctgcgagaaatgcggcgtcgaagtgactctgtccaaggtgcgccgcgag
cgcatggggcatatcgagctggcgtgccctgtggcacatatctggtatctgaagtcgctg
ccctcgcggatcggcttgctgctggacatgacgctgcgcgatatcgagcgcgttctgtac
ttcgaagccttcatcatcaccgatcccggcatgaccccgctgaacaagggtgatctgctg
accgacgagatgtatatcgacgcgctcgagcagtatggcgacgaattcgaggccgacatg
ggcgccgaagccatccagaagctgttgaaggacatcgatctcgatcagcagattctcggc
ctgcgcgacgaactggccgaaaccggttccgaaaccaagatcaagcgaatttccaagcgc
ctgaagctgttggaggctttcaaggagtccggtaaccgtcccgagtggatggtgctcacc
cagttgccggtgctgccgccggatctgcgtccgctggtaccgctcgatggtggccgtttc
gcgacgtcggatctgaacgatctgtaccgccgtgtgatcaaccggaacaaccgactgaag
cgtctgctggaaatcaacgcgccggacatcatcctgcgcaacgaaaagcggatgctgcag
gagtccgtcgactcgctgctggacaacggccgtcgcggtcgtgccgtcaccggcaccaac
aagcgtccgctgaaatccctggccgacatgatcaagggcaagcagggccgcttccgtcag
aacctgctcggtaagcgggtggactactccggtcgttccgtgatcgtggttggtcccgcc
ctgcgtctgcaccagtgcggtctgcccaagaagatggcgctcgagctgttcaagccgttc
atcttcggcaagctgcaccgtcgcggcctggcgaccacgatcaaggctgccaagaagctc
gtcgagcgtgaaggtccggaagtctgggacgttctggaagaggtgattcgcgaacatccg
gtgctgctgaaccgtgcgccgaccctgcaccgtctgggtatccaggcgttcgagccgatc
ctcatcgaaggtaaggcgattcagctgcacccgctggtgtgttccgcgtacaacgccgac
ttcgacggtgaccagatggccgttcacgtgccgctgtccctggaagcccaggccgaagcc
cgtgcgctgatgatgtccaccaacaacgtactgtcgcccgccaacggcgacccggtgatc
gtgccgtcccaggatatcgtcctcggtatctattacatgacgcgctcgaagatcaacggt
cgtggcgaagggatggtgttcgcggatctggacgaagtccagcgtgcgtacgacaaccat
caggtcgagctgggtgcgcagatcaaggtgcgcgtgaacgactgggtgcggttcgatgac
ggcacggccgaggccaagcgccacatcgtcgaaaccaccgtcggccgcgcgttgctgtat
cgcaccctgccgcaaggcgttccgttcgagcagatcaacaaggacatgggcaagaaggcc
atttccgcgctgctgaactatatctaccgcaagctcggcctgaaggacaccgttctcttc
gccgaccagttgatgtacaccggtttccggtatgcgacgcgttccggtatctcgatctgc
tccgatgacatgctggtgccgccgtccaagccgacggagctggccaaggccgaatccgag
gtgaaggagatccaggatcagtacgctcagggtctcgtgaccgagaaggagcgctacaac
aaggtcgtcgatatctggtctcgcgccaacgacgcgatctcccgcgcgatgatggagcag
ctcggcagcgagcaggtggtcaaccgcgaaggcgaaaccgtcaagcagagttccttcaac
gcgatcttcatgatggccgactccggtgcgcggggttccgctgcccagatccgtcagctt
gcgggtatgcgcggcctgatgtccaagccggacggctcgatcatcgaaacgcccatcacc
gcaaacttccgtgagggtttgaacgtactccagtacttcatctccacccacggtgcgcgt
aagggtctggccgatacggcactcaagaccgcgaactccggttacctgacccgtcgtctc
gtcgacgtggcccaggatctcgtgatcacgatggacgattgcggtaccaccgcaccgggc
atcaaggtcacggcggtgattgaaggcggtgacgtcgtgcagggtatcggcgcgcgaatt
ctgggtcgtaccacgtctcaggacgtgctgatgccgggttcggacgaagtgctggtgccg
gccaacacggttatcaacgaattcatggtatcccgcatcgaggattcgggtgtcgatgag
gtctgggttcgctccaccatttcctgcgaagcccgtcacggcatctgcgccatgtgctat
ggccgggatctggcgcgcggcaacgtcgtcaacatcggcgaatccgtcggcgtcatggcg
gcgcagtccatcggtgaaccgggtacccagctcaccatgcgtaccttccacatcggtggt
gcggcatcgcgttccgcggcggccagttccgttcagaacaagcagccgggtacggtgcgt
ctgcacaacctgaagacggttgtgaaccgggacaacgacctcgtggccgttacccgttcg
ggcgaactcggcatggtcgatgaccagggtcgtgagcgcgagcggtataaggttccctac
ggcgccgtgattcgggtgaaggaaggcgacaagatcgctcagggtacgaccctggcgacc
tgggatccgcacacccaccccgtcgtgagcgagatgaagggccaggcacgcttctccgat
ttcgtggacggtctgtccgtgaagtcggaaaccgacgaaatcaccggcttgacttcgcag
gtggtcatcgatccgaagcaccgcagcagttccgccgccaaggatctgcgcccggcgatt
gcgctggtggacgacgacggtcagccgatctgcctcgttggtaccgatattccggcgttc
tacgtactgccggccgaagcgatcatcggtatcgaggatggcgcgaccgtccaggtgggt
gacgtcatcgcgcgtatcccgcaggaatcctccaagacgcgcgacatcaccggtggtctg
ccgcgtgttgccgacctgttcgaagcacggaaacccaaggagcccgcgattctggccgag
tacaccggtacgatcagcttcggcaaggaaaccaagggcaagcagcgtctggtcatcacc
gacgagcacggcgaagcccatgaggaactgattccgaagtatcgcgtgatcaacgtgttc
gaaggcgagcacgtagcgcgcggcgaagtgatcgccgacggcgagctgaccccgcacgat
atcctgcgcctgcgcggggtaccggatctggcggcctacatcatcaaggagatccaggac
gtctaccgcctgcagggcgtcatgatcaacgacaagcacatcgaggtgatcgttcgccag
atgctgcgcaaggtcgagatcaccgaacccggcgattccggatatctccgtggcgatcag
gtcgacaaggcccgactcctcgaggagaaccgtcagctggagcaggcgggcaagttcccg
gcgaagtacgagccgatgctgctgggtatcaccaaggcatcgctggtaaccgaatccttc
atctcggcggcttcgttccaggaaacaacccgcgtattgaccgattcgtcgacccggggt
gcgcgcgatgaactgcgcggcctgaaggagaacgtcattgtgggtcgcctgatcccggcg
ggtaccggtctggcgcatcatcaggatcgccgtcgtcgtcgcaacagcacccttgaatcg
gcgaatgcgctgttcatggatgccgatgctcaggacgccggcgtggatgaaggagaaagc
gtggcatga
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integrated database retrieval system
