Halothiobacillus diazotrophicus: A9404_10955
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Entry
A9404_10955 CDS
T04441
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
haz
Halothiobacillus diazotrophicus
Pathway
haz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
haz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
A9404_10955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
haz03400
]
A9404_10955
Enzymes [BR:
haz01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
A9404_10955
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
A9404_10955
DNA repair and recombination proteins [BR:
haz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
A9404_10955
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
ANJ67828
UniProt:
A0A191ZJ10
LinkDB
All DBs
Position
complement(2459102..2459932)
Genome browser
AA seq
276 aa
AA seq
DB search
MPELPEVETTRRGIEPHCLDRRIVRAQVHDPRLRWPVRGDLTEWLKDRRITDVSRRAKYL
LIAFENGERLLIHLGMSGSLRLVEPGTPKRKHDHVEIEFDSGRILRYHDPRRFGALLTDH
VDNPHERLANLGPEPLGPDFTPEYLHRKLQNRLVAIKPLIMSADIVVGAGNIYANEALFL
AGIHPTTSASRCDRDAVTRLVAAIRDVLARAIEQGGTTLRDFVREDGQPGYFKQTLNVYD
RADQPCRVCSTPIRKFTQAQRATYCCPVCQPPPSPD
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgcccgagctacctgaagtcgaaaccacccgtcggggcatcgagcctcactgccttgac
cgccggatcgtccgtgcccaggtgcacgatccccgactgcggtggccagtgcgtggcgac
ctgaccgagtggctgaaggatcgccgtatcacggatgtttcccggcgcgccaaatacctg
ctcatcgcattcgagaacggtgaacgcctgctgattcacctcggcatgtccggcagcctg
cgcctcgtcgagcccggcacgccgaaaagaaagcacgatcacgtcgaaatcgaattcgac
agcggccggatcctgcgctatcacgatccgcgccgcttcggcgcgctgctcaccgaccac
gtggacaacccgcacgagcgactcgcgaatctgggacccgaaccactcggccccgacttc
acgcccgaatacctgcaccggaagctgcaaaaccgcctcgtcgccatcaagccgctcatc
atgagcgcggacatcgtcgtcggcgccgggaacatctatgccaacgaggccctgttcctg
gcaggcatccacccgacgacctccgccagtcgctgcgaccgggatgcagtcacccgactg
gtcgcggcaatccgggacgtcctcgcccgcgccatcgaacagggcggcacgacgctgcgc
gatttcgtccgggaagatggacagccgggctacttcaagcagacactgaacgtgtacgat
cgcgccgatcagccctgccgcgtctgcagcacgccgatccgaaaattcacccaggcacaa
cgggccacctattgctgccccgtctgccaaccacccccgtcacctgactga
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