KEGG   Halomicrobium sp. ZPS1: GBQ70_01190
Entry
GBQ70_01190       CDS       T07700                                 
Name
(GenBank) flap endonuclease-1
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
hazp  Halomicrobium sp. ZPS1
Pathway
hazp03030  DNA replication
hazp03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:hazp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    GBQ70_01190
   03410 Base excision repair
    GBQ70_01190
   03450 Non-homologous end-joining
    GBQ70_01190
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hazp03032]
    GBQ70_01190
   03400 DNA repair and recombination proteins [BR:hazp03400]
    GBQ70_01190
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:hazp04147]
    GBQ70_01190
DNA replication proteins [BR:hazp03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    GBQ70_01190
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     GBQ70_01190
DNA repair and recombination proteins [BR:hazp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     GBQ70_01190
Exosome [BR:hazp04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   GBQ70_01190
SSDB
Motif
Pfam: XPG_I XPG_N 5_3_exonuc 5_3_exonuc_N
Other DBs
NCBI-ProteinID: QFR19119
UniProt: A0A5P8LSH6
LinkDB
Position
complement(219643..220623)
AA seq 326 aa
MGNADLRSLASLEDVPFEELSDSVVAVDAHNWLYRYLTTTVRFTSDEKYTTSDGTEVANL
IGVVQGLPKFFEHDLTPVFVFDGGVTELKDDEVEQRREAREAREEKLEAARERGDSKAVA
RLDSQTQRLTDTILTTTREVLRLLDVPVVDAPAEGEAQAAHMARQNVVDYVGTEDYDALL
LGAPLTLRQLTSSGDPELMDFQATLDHHGITWEQLVDAAILMGTDFNPGIDGVGPKTAIK
LVKEHGDLWGALDARDAHVEHGDRIRELFLDPAVTDDYDLDLAVNPDLDAAREYVTGEWE
VDEGEVARAFEHIEASVVQTGLDDWA
NT seq 981 nt   +upstreamnt  +downstreamnt
atgggaaacgcagacctacgatcgctggcgtcgctcgaagacgttcccttcgaggagctg
agtgacagcgtcgtcgccgtcgacgcccacaactggctctaccggtatctcacgaccacg
gttcggttcaccagcgacgagaagtacaccaccagcgacgggacggaggtggcgaacctg
atcggcgtcgtccaggggctcccgaagttcttcgaacacgacctgacgccggtcttcgtc
ttcgacggcggcgtcacggaactcaaagacgacgaggtcgagcagcgccgcgaggcccgc
gaggcccgcgaggagaaactcgaagccgcccgcgagcgcggggactcgaaagctgtcgct
cggctggactcccagacccagcgcctgaccgacacgatcctcacgacgactcgcgaggtg
ctgaggctgctggacgtgcccgtcgtcgacgcgcccgcagagggcgaggcccaggctgcc
cacatggcacgccagaacgtcgtcgactacgtcgggaccgaagactacgacgcgctcctg
ctcggcgcaccgctgacgctgcgccaactcaccagcagcggcgaccccgaactgatggac
ttccaggcgacgctggaccaccacggcatcacctgggagcaactggtcgacgccgcgatc
ctgatggggacggacttcaatcccggcatcgacggtgtcgggccgaagaccgcgatcaag
ctggtgaaagagcacggcgacctctggggcgcgctcgacgcccgcgacgcccacgtcgaa
cacggcgaccgcatccgagagctgttcctcgatccggcggtcacggacgactacgacctc
gatctggcggtgaacccggaccttgacgccgcccgcgagtacgtcaccggcgagtgggag
gtcgacgaaggcgaggtcgcgcgcgccttcgagcacatcgaggccagcgtcgtccagacc
ggactggacgactgggcctga

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