Halomicrobium sp. ZPS1: GBQ70_03410
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Entry
GBQ70_03410 CDS
T07700
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
hazp
Halomicrobium sp. ZPS1
Brite
KEGG Orthology (KO) [BR:
hazp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hazp03016
]
GBQ70_03410 (truD)
Enzymes [BR:
hazp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
GBQ70_03410 (truD)
Transfer RNA biogenesis [BR:
hazp03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
GBQ70_03410 (truD)
Prokaryotic type
GBQ70_03410 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
QFR19544
UniProt:
A0A5P8LTS6
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All DBs
Position
complement(672143..673492)
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AA seq
449 aa
AA seq
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MRPAQPIEQAVGMRYYVSDGDGIGGRLRASPEDFAVRELEAFEAEPADADSGAYAHLVVR
ATLHNWDTNDFASALSDRLGISRERVSWAGTKDKRAVTTQLFSIADADAADVPEIDGAEI
DVVGRAGRPVLFGDLAGNAFEIIVREVDRPDGVDGITEQLREFAGSADAADEPTVAVPNY
FGQQRFGSKRPITHEVGLAIVRNDWEGAVMAYLGNPNEREPEATQAARAYVEETHDWEGA
LERFPRALGYERALCHSLADADDASPAAFRSALETLPTNLQTLFVNAAQSYLFNRVLSER
LDRGLPFDRPVAGDVVCFADSDAPDGLPLPDTDRTQRVTAGRVDTVERHCERGRAFVTAP
LVGTETELAEGEPGEIERAVLADAELEPTDFALPGEFDSSGTRRAVQVRSQIDVRRRDGD
AVEFAFSLPKGSYATVLLREYLKRDPAQL
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgcgcccagcccagccgatcgagcaggccgtcggaatgcgctactacgtcagcgacggc
gacggcatcggtggccgactccgtgcctcgcccgaggacttcgcggtccgggaactggag
gcgttcgaggccgaacccgccgacgccgacagcggcgcgtacgctcacctcgtcgtgcgc
gcgacgctgcacaactgggacacgaacgacttcgcgtcggcgctgtcggatcgtctcggc
atctctcgggagcgcgtctcgtgggcggggacgaaagacaagcgggccgtgacgacccag
ctgttctcgatcgccgacgcggacgcggccgacgtgcccgagatcgacggcgcggagatc
gacgtcgtcgggcgggcgggacgaccggtgctgttcggcgacctcgccggcaacgccttc
gagatcatcgtccgggaggtggaccgccccgacggcgtcgacgggatcaccgagcaactg
cgcgagttcgccggcagcgccgacgccgccgacgagccgacggtcgcggtgccgaactac
ttcggtcagcaacgcttcggcagcaagcgcccgatcacccacgaggtcgggctggcgatc
gtccggaacgactgggagggcgcggtgatggcctacctcgggaacccaaacgagcgcgag
cccgaggcgacacaggcggcacgggcctacgtcgaagagacccacgactgggagggggca
ctggagcggttcccgcgagcgctggggtacgagcgggcgctctgtcacagtctggccgac
gccgacgacgcctccccagcggcgttccggagcgcgctggagacgctgccgacgaacctc
cagacgctcttcgtcaacgccgcccagtcgtacctgttcaaccgcgtcctctcggaacgc
ctcgaccgcgggcttcccttcgaccgccccgtcgctggcgacgtggtctgtttcgccgat
agcgacgcgccagacggcctcccgctccccgacaccgaccgcacacagcgggtcactgcc
gggcgcgtcgacaccgtcgagcgacactgcgagcggggccgggcgttcgtcactgctccc
ctcgtcgggaccgagacggagctggcagagggcgaacccggcgagatcgaacgcgcggtg
ctcgccgacgccgaactcgaaccgaccgacttcgcgctccccggtgagttcgactcgtcg
ggaacccggcgtgcggttcaggtccggagccagatcgacgtccggcgacgcgacggggac
gcggtcgagttcgcgttctcgctgccgaaaggcagctacgcgacggtcctgctccgtgag
tacctgaagcgcgatccggcccagttgtaa
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