Halomicrobium sp. ZPS1: GBQ70_05915
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Entry
GBQ70_05915 CDS
T07700
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hazp
Halomicrobium sp. ZPS1
Pathway
hazp03420
Nucleotide excision repair
hazp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hazp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GBQ70_05915
03430 Mismatch repair
GBQ70_05915
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hazp03400
]
GBQ70_05915
Enzymes [BR:
hazp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GBQ70_05915
DNA repair and recombination proteins [BR:
hazp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GBQ70_05915
MMR (mismatch excision repair)
Other MMR factors
GBQ70_05915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
UvrD_C_2
AAA_30
DEAD
AAA_22
AAA_11
Herpes_ori_bp
nSTAND_NTPase5
Motif
Other DBs
NCBI-ProteinID:
QFR20006
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Position
complement(1169673..1171514)
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AA seq
613 aa
AA seq
DB search
MTDTSPQVVRLFGGPGSGKTTALLDRVEELLSEDDADVRDILVVSYTRAAAAEIRERLAE
RLDINPRSLKGNVCTMHAKAYELLDLSRGDVVGESDKEDFCDEFGLEFEDEYEGSRRRSA
RSTTLGNKVIATSQWLQRTRRDVADWYDVPFKWDEEEVRLPPEIDDNAQTGNKYTPTWPG
DDDRLDVPEAIRAWRTYKGDNDLTGFADMLERVKQRSLLPNVEYLIIDEFQDITTLQYDV
YEEWKPRMTKILIAGDDDQVVYAWQGADPDLLLEEDVDVDEVLPNSYRLPSSILNVVNRE
VRHIEKRQEKDLNPRKEGGEVLPMLNPSMLDLVREIRRTVDDDEGTVMILFRARYQMFQF
MDEFIGEGIPFTCLTDQRMWTDRLTEYVRGVEALDADERLSVLEGRRLADMLADSAFGTG
DRDDLFDELDEIADASEKDDLADIEMDPDVIREHAPFAPDPRAAADMLRKVTNFQERTVE
AYFHGEYAGMDADQVRLGTIHSAKGREADHVFVGTDLTEKVVEQMAAQVEQNDRHVPGDE
EFTKHTDPIPTLTDNERRVFYVGMSRARERLVLMENLVDGAPTLPIDVILENEPRPDSPE
ELLIEAQEPLPTP
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgactgacacgagcccgcaggtggtccggctgttcggtggtccggggagcgggaagacg
acggcgctgctcgaccgcgtcgaagaactgctgtccgaggacgacgccgacgtgcgcgac
atcctggtcgtctcgtacacccgtgcggccgccgccgagatccgcgagcgactggccgaa
cgactcgacatcaacccacgttctctgaaggggaacgtctgtacgatgcacgcgaaggcg
tacgaactgctcgacctctctcggggcgacgtggtcggcgagtccgacaaggaggacttc
tgtgacgagttcgggctggagttcgaagacgagtacgaaggctctcgccgtcggtcggcc
cgctcgacgacgctcgggaacaaggtcatcgccacgagccagtggctccagcgcactcgc
cgagacgttgccgactggtacgacgtgcccttcaagtgggacgaggaggaggtccggctt
ccgcccgagatcgacgacaacgcccagactggcaacaagtacacgccgacctggcccggc
gacgacgaccgactcgacgtgcccgaagcgatccgcgcctggcgcacctacaagggcgac
aacgacctcaccgggttcgcagacatgctcgaacgggtcaagcagcgatcgctgctgccc
aacgtcgagtacctcatcatcgacgagtttcaggacatcaccaccctccagtacgacgtg
tacgaggagtggaaaccccgcatgacgaagattctcatcgcgggcgacgacgaccaggtc
gtctacgcctggcagggtgccgaccccgatctgttgctggaggaagacgtcgacgtcgac
gaggtcctgcccaactcataccgactgccgtcctcgattctcaacgtggtcaaccgcgag
gtgcgccacatcgagaagcgccaggagaaagacctcaacccgcgcaaggagggcggcgag
gtgttgccgatgttgaacccctcgatgctcgatctggtccgcgagatccgccggaccgtc
gacgacgacgagggaaccgtgatgatcctctttcgggcgcggtaccagatgttccagttc
atggacgagttcatcggcgaggggatccccttcacctgcctgaccgaccagcggatgtgg
accgaccggctcaccgagtacgttcgcggcgtcgaggcgctggacgccgacgaacgcctc
tccgtgctagagggtcgccggctcgcggacatgctcgccgactccgctttcgggaccggc
gaccgcgacgacctgttcgacgaactcgacgagatcgcagacgccagcgagaaagacgat
ctggcggacatcgagatggatccggacgtgatccgcgaacacgcaccgttcgcgcccgat
ccgcgggccgccgccgacatgctccggaaggtgaccaacttccaggagcggaccgtcgag
gcctacttccacggggagtacgccggtatggacgccgatcaggtccggctggggacgatt
cactccgccaagggccgcgaggccgaccacgtcttcgtcggcaccgacctcaccgagaag
gtcgtcgagcagatggccgcacaggtcgagcaaaacgaccgccacgtgccgggcgacgag
gagttcaccaagcacaccgatccgatcccgaccctgaccgacaacgaacggcgcgtgttc
tacgtcggcatgagccgcgcccgcgagcgactcgtcctgatggagaacctcgtcgacggt
gcgccgacgctccccatcgacgtgatcctggagaacgagcccaggcccgattcccccgag
gagcttctgatcgaggcgcaggaaccgctgccgacgccctga
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