Halomicrobium sp. ZPS1: GBQ70_06500
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Entry
GBQ70_06500 CDS
T07700
Symbol
endA
Name
(GenBank) tRNA-intron lyase
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
hazp
Halomicrobium sp. ZPS1
Brite
KEGG Orthology (KO) [BR:
hazp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hazp03016
]
GBQ70_06500 (endA)
Enzymes [BR:
hazp01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
GBQ70_06500 (endA)
Transfer RNA biogenesis [BR:
hazp03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
GBQ70_06500 (endA)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo_N
tRNA_int_endo
Motif
Other DBs
NCBI-ProteinID:
QFR20109
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Position
complement(1271121..1272131)
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AA seq
336 aa
AA seq
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MDATLSDGVVRAGKQAREQFYDSSGYGRPVDAGKLELAPVEAAHLLYRGDLDGVDGMGLR
ELLNSALLSEVDFFVYKDLRDRGFYCSPARSERVADPDGCDFVVYPRGKGPWDDAVAHRI
RVVSERETVPAADLGACALAVVDEESEISYFETHRPDVTGTSRSSVPETDGDLLADRVVC
WDPPAELYEAAFYGQPLDEQDAQAIQLSLVEAAYLAGTGTLHVEGDADAVIERGRAVEGD
RFDRRLAVYERLREQGVAPKTGFKFGADFRTYADVESVADLGHSELLVRAFDAGHVFEPR
DLALDVRLAHGVRKTMAYAFVGDEGIDWLAVERLTP
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atggatgcgacgctctccgatggggtcgtccgggccggcaagcaggcccgcgagcagttc
tacgactccagcgggtacggtcggccggtcgacgccgggaagctcgaactggcacccgtc
gaggcggcacacctgctgtatcgcggtgacctcgacggtgtcgacgggatgggacttcgg
gagctactgaactccgcgttgctgtcggaggtcgacttcttcgtctacaaggacctgcgc
gaccgggggttctactgctcgccggcccgctcggagcgcgtcgcggaccccgacggctgt
gacttcgtcgtctatccacggggcaaggggccgtgggacgacgccgtcgcccaccggatc
cgggtcgtcagcgagcgcgagacggtcccggcagccgatctgggggcgtgtgcgctggcc
gtcgtcgacgaggagagcgagatcagctacttcgagacccaccgtccggacgtgaccggg
acgagtcggtcgtccgtccccgaaaccgacggcgatctgctcgcagacagggtcgtctgc
tgggacccgcccgccgaactgtacgaagcggccttctacgggcaaccgctcgacgagcag
gacgcacaggcgatccagctctcgctggtcgaggccgcgtacctcgccgggacgggcacc
ctccacgtcgagggcgatgccgacgcggtgatcgaacgcggtcgcgccgtcgagggcgat
cggttcgaccgccggctcgcggtgtacgaacggcttcgagagcagggtgtcgcgcccaaa
acgggcttcaagttcggcgctgacttccggacctacgcggacgtcgagagcgtcgcggac
ctgggccactccgaactgctcgtgcgggcgttcgacgccggccacgtcttcgagccccga
gatctcgcactggacgtgcgcctagcccacggcgtgcgcaagacgatggcctacgcgttc
gtcggcgacgaggggatcgactggctggccgtcgagcggctgacgccctga
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