Halomicrobium sp. ZPS1: GBQ70_06810
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Entry
GBQ70_06810 CDS
T07700
Name
(GenBank) DNA-directed RNA polymerase subunit E''
KO
K15171
transcription elongation factor SPT4
Organism
hazp
Halomicrobium sp. ZPS1
Pathway
hazp03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
hazp00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
GBQ70_06810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hazp03021
]
GBQ70_06810
03019 Messenger RNA biogenesis [BR:
hazp03019
]
GBQ70_06810
Transcription machinery [BR:
hazp03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
GBQ70_06810
RNA polymerase I system
GBQ70_06810
Messenger RNA biogenesis [BR:
hazp03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
GBQ70_06810
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spt4
DZR_2
FAP42_B2
HVO_2718_N
Motif
Other DBs
NCBI-ProteinID:
QFR20165
LinkDB
All DBs
Position
complement(1335910..1336107)
Genome browser
AA seq
65 aa
AA seq
DB search
MADRLVCRDCHRVQPSEAEESCEICGSTSLTEDWAGYVVIAHPETSEIAEEMEVTESGQY
ALKVR
NT seq
198 nt
NT seq
+upstream
nt +downstream
nt
atggctgatcgcctcgtctgtcgtgactgtcaccgcgtccagccctccgaagccgaagag
tcctgcgagatctgtggctcgacctcgctgacggaagactgggccggctacgtcgtcatc
gcccaccccgagacctccgagatcgccgaggagatggaagtgaccgagtccggccagtac
gcactgaaagtccgctaa
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