Halomicrobium sp. ZPS1: GBQ70_09680
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Entry
GBQ70_09680 CDS
T07700
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
hazp
Halomicrobium sp. ZPS1
Brite
KEGG Orthology (KO) [BR:
hazp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hazp03016
]
GBQ70_09680 (truA)
Enzymes [BR:
hazp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
GBQ70_09680 (truA)
Transfer RNA biogenesis [BR:
hazp03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
GBQ70_09680 (truA)
Prokaryotic type
GBQ70_09680 (truA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
QFR20695
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Position
1878090..1878881
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AA seq
263 aa
AA seq
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MRAYRIAYDGQPYHGFQRQPDVETVEGELLATLDRLGVTAGDVPAGYAAAGRTDAGVSAL
AQTVAFEAPEWLSPAAFNSELPASVRVWASADVPDDFHATHDAREREYVYYLYAPERHDD
RARRAADALSGEHDFHNLTPDDSGTVRALSIDLTREGEFLVCRLRAGGFCRQLVRRVVGL
VDEIRRGDAPLSKVDRVLGSKPIDGAAGVGPASPTPLVLVAVDYGVEFSVDADARESTRS
VFTDRLVERLAGARVVGAIRDGI
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgcctatcggatcgcttacgacggccagccgtaccacgggttccagcgccagccc
gacgtcgagacggtcgagggggagctactggccacactggatcgactcggtgtcacggct
ggggatgtcccagcgggctacgccgccgccggccgaacggacgctggcgtctcggcactg
gcccagaccgtcgccttcgaggccccggagtggctctctccggcagcgttcaacagcgaa
cttccggcgtcggtccgcgtgtgggcgagcgccgacgtgcccgacgactttcacgcgacc
cacgacgccagagagcgcgagtacgtctactatctgtacgcgcccgagcgccacgacgac
cgggctcgccgggccgcggacgctctctccggcgagcacgactttcacaacctcacgccg
gacgacagtggcactgtcagagcgctctcgatcgatctcacgcgagagggcgagtttctc
gtctgccggctccgtgccggcggtttctgccgccaactcgtccgccgggtcgtcggtctc
gtcgacgagattcgccgcggcgacgctccgctgtcgaaggtcgatcgcgtgctcggctcg
aagccgatcgacggggcggccggcgtcggtcccgcgtcgccgaccccgctggtcctggtc
gctgtcgactacggtgtcgagttctccgtcgacgccgacgcccgcgagagcacgcggtcg
gtcttcaccgatcgcctcgtcgagcgactcgccggagcccgcgtcgtcggtgcgattcgg
gacgggatctga
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