Halomicrobium sp. ZPS1: GBQ70_11785
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Entry
GBQ70_11785 CDS
T07700
Name
(GenBank) RNA-guided pseudouridylation complex pseudouridine synthase subunit Cbf5
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
hazp
Halomicrobium sp. ZPS1
Brite
KEGG Orthology (KO) [BR:
hazp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hazp03016
]
GBQ70_11785
Enzymes [BR:
hazp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
GBQ70_11785
Transfer RNA biogenesis [BR:
hazp03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
GBQ70_11785
Prokaryotic type
GBQ70_11785
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_C_2
TruB_N
DKCLD
PUA
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
QFR21095
LinkDB
All DBs
Position
complement(2290840..2291739)
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AA seq
299 aa
AA seq
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MVRDSPEHRSPADLLTFGVVNLDKPPGPSAHQVAAWVRDAVDDALDAAGDDRTLGRVAHG
GTLDPKVTGCLPILLGDAARAARVFDDAVKEYVTILELHDQAPPDFDSIVAEFEGEIYQK
PPRKSAVKRRLRSRTIHALDVLERHDRRALLRVRCGSGTYVRKLCHDIGLALGTGAHMGE
LRRTATGDFDDRDLVTMEDLVDALAEWTDNDDETWLHETVAPAERALAGYPTVTIAPSAA
REVAHGAPVYAPGVIETDAEQGADVCCVTPDGAAVCLGRLVGDPDADSGVAVELERVLV
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggtccgcgactcgcccgaacaccggtcgcccgccgatctgctcaccttcggcgtcgtc
aacctcgacaagccacccggcccctccgcccaccaggtggccgcctgggtccgggacgcc
gtcgacgacgcgctcgacgcggccggcgacgaccggacgctcgggcgcgtcgcacacggc
ggaacgctcgacccgaaggtcacgggctgtctcccgatcttgctcggcgacgccgcccgc
gcggcacgcgtgttcgacgacgcagtcaaagagtacgtcacgattctcgaactccacgac
caggccccgccggacttcgactcgatcgtcgccgagttcgagggcgaaatctaccagaag
cccccgcgcaagagcgccgtgaaacgacggctccgcagccggacgatccacgcgctagac
gtcctcgaacgccacgatcgccgggcgctcctgcgcgtccgctgtggctctggaacgtac
gtccgaaagctctgtcacgacatcgggctcgcgctcgggaccggcgcacacatgggcgaa
ctccgacgcaccgcgaccggcgacttcgacgatcgcgacctcgtcaccatggaggacctc
gtcgacgcactggccgagtggaccgacaacgacgacgagacgtggctccacgagaccgtc
gcacccgcggaacgcgccctggccggctatcccacggtgaccatcgcacccagcgccgcc
cgcgaagtggcacacggcgcaccggtctacgcacccggcgtgatcgagaccgacgccgag
cagggtgccgacgtgtgctgcgtgacacccgacggcgcggcggtgtgtctgggcagactg
gtcggcgaccccgacgccgacagcggcgtcgccgtcgaactcgaacgcgtcctcgtctaa
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