Halomicrobium sp. ZPS1: GBQ70_12020
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Entry
GBQ70_12020 CDS
T07700
Name
(GenBank) CDC48 family AAA ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
hazp
Halomicrobium sp. ZPS1
Pathway
hazp04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
hazp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
GBQ70_12020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hazp03019
]
GBQ70_12020
03009 Ribosome biogenesis [BR:
hazp03009
]
GBQ70_12020
04131 Membrane trafficking [BR:
hazp04131
]
GBQ70_12020
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hazp04147
]
GBQ70_12020
Messenger RNA biogenesis [BR:
hazp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
GBQ70_12020
Ribosome biogenesis [BR:
hazp03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
GBQ70_12020
Membrane trafficking [BR:
hazp04131
]
SNARE
SNARE associated proteins
Others
GBQ70_12020
Autophagy
Aggrephagy
Other aggrephagy associated proteins
GBQ70_12020
Exosome [BR:
hazp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
GBQ70_12020
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
CDC48_N
AAA_lid_3
CDC48_2
RuvB_N
AAA_16
AAA_5
AAA_22
TIP49
AAA_2
AAA_33
AAA_14
nSTAND3
NPHP3_N
RNA_helicase
AAA_28
Mg_chelatase
AAA_7
IstB_IS21
AAA_18
NB-ARC
ABC_tran
AAA_3
ATPase
AAA_17
DUF815
Sigma54_activat
Parvo_NS1
TsaE
AAA_30
nSTAND_NTPase5
AAA_11
AAA_24
NACHT
SLFN-g3_helicase
PhoH
Vps4_C
Motif
Other DBs
NCBI-ProteinID:
QFR21139
LinkDB
All DBs
Position
complement(2344029..2346251)
Genome browser
AA seq
740 aa
AA seq
DB search
MNEVQLEVAKAYPNDSGRGIARLDPDTLLHLKLSPGDIIEIEGSETTAAKVWRADRQDWN
TDTVRIDGFTRQNADVGIGERVTIRKADAEKADKLVLAPPEEASVQFGSDAAGMVKRQIL
KRPVVERDIVPVMSSTNHPFMRSPGQAIPLIAVETEPEGVCLITEDTDVELREEPISGFE
KTGGGITYEDIGGLSSEIQRVREMVELPMKHPQIFKKLGIEPPQGVLLHGPPGTGKTLLA
KAVANETSASFFSIAGPEIISKYYGESEQQLREIFEDASEEAPSIIFIDELDSIAPKRED
VTGEVERRVVAQLLTMMDGLESRGQVIVIAATNRVDSVDPALRRPGRFDREIEIGVPDEV
GREEILQIHTRGMPLSDDVALSNLATETHGFVGADIESLTKEAAMKALRRYLPEIDLDEE
DIPPSLIDRMIIKREDFRGALNEVSPSAMREVLVELPKISWDDVGGLDDAKEQVQESVEW
PMNSPEKFERMGVSPPSGVLLYGPPGTGKTLMAKAVANETDANFISVRGPQLLSKWVGES
EKAIRQTFRKARQVAPTVIFFDELDSLAPGRGGETGSNVSERVVNQLLTELDGLEEMEEV
MVIGATNRPDMIDPALIRSGRFDRLVMVGEPGIEGREQILKIHTDDTPLSPDVSLRELAE
MTDGYVGSDLESIGREAAIEALREDDDAEMVEMRHFRQAMENVRPTITDDIRDYYEQMQD
EFKGGGEPQQTRGGGRIGFQ
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaggttcaactggaggtcgcgaaagcgtacccgaacgactcggggcgcggtatc
gctcgcctggatccggacacgctcttgcatctcaagctctcgcccggcgacatcatcgag
atcgagggaagtgagaccaccgccgcgaaagtgtggcgtgcggatcgacaggactggaac
accgacacggtgcgcatcgacggtttcacgcgacagaacgccgacgtgggcatcggcgaa
cgcgtgacgatccgcaaggccgacgccgagaaggccgacaagctcgtgctggctccgccg
gaggaagccagcgtacagttcggctcggacgcggccggcatggtcaagcgccagatcctc
aagcgcccggtcgtcgagcgcgacatcgtccccgtaatgtccagtacgaaccacccgttc
atgcgctcgccgggccaggcgatcccgctgatcgccgtcgagaccgagccggagggcgtc
tgtctcatcaccgaggacacggacgtggagttgcgcgaagagcccatcagcggcttcgag
aagaccggcggcggcatcacctacgaggacatcggcggcctctccagtgagatccagcgg
gtccgcgaaatggtcgagttgccgatgaaacacccccagatcttcaagaagctcggcatc
gagccgccacagggggtgttgctccacggtccaccgggtacgggcaagaccctgctcgcg
aaggccgtcgccaacgagacctccgccagtttcttttctattgccggtccggagatcatc
tcgaagtactacggcgagtccgaacagcaactcagggagatcttcgaggacgccagcgag
gaggctccctcgatcatcttcatcgacgagctagactcgatcgcgcccaagcgcgaggac
gtgaccggcgaggtcgagcgccgcgtcgtcgcccagctgctgacgatgatggacggtctc
gaatcacgcggccaggtcatcgtcatcgccgcgaccaaccgcgtcgacagcgtcgacccg
gcactgcgccggccgggccggttcgaccgcgagatcgagatcggcgtccccgacgaggtc
ggccgcgaggagatcctccagatccacacccgcgggatgcctctctcggacgacgtggcc
ctctcgaatctggcgaccgagacccacggcttcgtcggtgccgacatcgagagcctgacc
aaagaggccgcgatgaaggcgctgcgtcggtacctccccgagatcgacttagacgaggag
gacatcccgccgagcctgatcgaccgcatgatcatcaaacgggaggacttccgcggggcc
ctcaacgaggtgagtcccagcgccatgcgggaggtgctggtcgagctcccgaagatctcc
tgggacgacgtgggcggtctcgacgacgccaaagagcaggtccaggagtccgtcgagtgg
ccgatgaacagcccggagaagttcgagcgcatgggcgtctcaccgccatctggcgtcctg
ctgtacgggccgccggggaccggaaagaccctgatggccaaagccgtcgccaacgagact
gacgccaacttcatctcggtgcggggaccacagctcctctcgaagtgggtcggcgagtcg
gagaaggcgatccgtcagaccttccggaaggcccggcaggtcgcaccgacggtgatcttc
ttcgacgaactcgactccctcgcaccgggacgtggcggcgagaccgggagcaacgtttcc
gaacgcgtcgtcaaccagctgctgaccgaactcgacgggctcgaagagatggaagaggtg
atggtgatcggcgcgaccaaccggccggacatgatcgatccggcactgatccgctcgggt
cggttcgaccggctggtgatggtcggcgaacccggtatcgagggccgcgagcagatcctc
aagatccacaccgacgacacgccgctgtcgccggacgtgagcctgcgcgaactcgcggag
atgaccgacggctacgtcggctccgacctggagtcgatcggccgcgaggccgccatcgag
gcgctgcgcgaggacgacgacgccgagatggtcgagatgaggcacttccggcaggccatg
gagaacgtgcgcccgacgatcaccgacgacatccgcgactactacgagcagatgcaagac
gaattcaagggcggcggcgaaccccagcagacccgcggtggcggccgcatcggcttccag
tag
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integrated database retrieval system
