Halomicrobium sp. ZPS1: GBQ70_15210
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Entry
GBQ70_15210 CDS
T07700
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
hazp
Halomicrobium sp. ZPS1
Pathway
hazp03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hazp00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
GBQ70_15210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hazp03021
]
GBQ70_15210
Transcription machinery [BR:
hazp03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
GBQ70_15210
Prokaryotic type
Archaeal type
TFB
GBQ70_15210
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_C
BRF2-like_C_cyclin_rpt
DZR_2
Sigma70_r4
DZR
Cyclin_N
Zn_ribbon_LysW
Trm112p
Cas12f1-like_TNB
GFA
Zn_ribbon_tTFIIB
Zn_ribbon_PaaD
Motif
Other DBs
NCBI-ProteinID:
QFR21733
LinkDB
All DBs
Position
complement(2956062..2957036)
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AA seq
324 aa
AA seq
DB search
MSEIHTRTNSGEQQTSTEIETEEESVDESLCPECGGHTQLDAEHGETVCEECGLVVEEDE
IDHGPEWRAFDASERDSKSRVGAPTTKMMHDKGLSTNIGWQDKDAYGNSLSSSQRQKMQR
LRTWNERFRTRDSKERNLKQALGEIDRMASALGLPKNVRETASVIYRRALDEDLLPGRSI
EGVATSALYAAARQANNPRSLDEMTHVSRVERMELTRTYRYIIRELGLEVAPAKPESYVP
RFCSELSLSDETERRARELIEAARDGGILSGKSPVGIAAAAVYAAALLTNEKVTQSEVSG
VADISEVTIRNRYKELLDVDGLPA
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagatacacacccgaaccaacagcggcgaacagcagaccagcacagagatcgag
acggaggaggaaagcgtcgacgagagtctctgcccagagtgtggcggccacacacagctc
gacgcggaacacggcgagacggtgtgtgaagagtgcggactggtcgtcgaggaagacgag
atcgaccacgggcccgagtggcgcgcgttcgacgccagcgagagagacagcaagtcccgc
gtcggtgcgccgacgaccaagatgatgcacgacaaggggctgtcgaccaacatcggctgg
caggacaaggacgcctacggcaactccctgtccagctcccagcgccagaagatgcagcgt
ctgcgcacctggaacgagcggttccggacacgcgactccaaggagcgcaacctcaagcag
gcgcttggcgagatcgaccgcatggcctcggcgctcggactccccaagaacgtccgcgag
accgccagcgtcatctatcgccgcgcgctcgacgaggacctgctgcccggccgctccatc
gagggcgtcgccacctcggcgctgtacgccgccgcgcgtcaggcgaacaacccccggtca
ctcgacgagatgacccacgtctcacgcgtcgaacggatggaactcacccggacctaccgc
tacatcatccgggagctgggcctggaagtcgccccggcaaagcccgagagctacgtcccg
cgcttttgcagcgagctgtcgctgtcggacgagaccgagcgacgcgcacgcgaactgatc
gaagccgctcgcgacggtggcattctcagcgggaagtcgccggtcggaatcgcggccgcg
gccgtgtacgccgctgcactgctgaccaacgaaaaggtcacccagagcgaggtcagcggc
gtcgcggacatctccgaggtcacgatccgcaaccgctacaaggaactgctcgacgtcgac
ggcctcccggcgtaa
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