KEGG   Halomicrobium sp. ZPS1: GBQ70_15270
Entry
GBQ70_15270       CDS       T07700                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
hazp  Halomicrobium sp. ZPS1
Brite
KEGG Orthology (KO) [BR:hazp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hazp03400]
    GBQ70_15270
Enzymes [BR:hazp01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     GBQ70_15270
    5.6.2.6  RNA 3'-5' helicase
     GBQ70_15270
DNA repair and recombination proteins [BR:hazp03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    GBQ70_15270
SSDB
Motif
Pfam: DEAD_assoc DEAD Helicase_C WH_Lhr ResIII AAA_25 AAA_19
Other DBs
NCBI-ProteinID: QFR21744
UniProt: A0A5P8M0B2
LinkDB
Position
2968634..2971453
AA seq 939 aa
MSETGADAFTALGGSVRSALSERGFTTPTEPQRKAIPPLAAGDDALVVAPTGTGKTETAM
LPVFDALADEDRFGIGALYVTPLRALNRDMRERLDWWGDALDLEIDVRHGDTTDYQRQQQ
ADDPPDVLVTTPETLQAMLTGSKLRTALEDVAHVVVDEVHELAAAKRGAQLTVGLERLRE
VSGPVQRIGLSATVGDPEAVGRFLTGDRGCRIVEVDVGSRLDVSVVRPTVTDADERLASE
LVTDPEVASHVRRIDELIAAHDSVLVFVNTRQTAEALGSRFKELGTNLGVHHGSLAKETR
IDVEDRFKEGDLDALLCTSSMELGIDVGHVDHVVQYGSPRQVARLLQRVGRAGHRRDLLS
SGTVVTTHPDDTLEALAITRQALDGEVEPAEIHDGSLDTVANQVPGIVMDVGEIRAMEAY
EIVTRAYPFRDLTTEEFREVVRELAENRVLWVDEENDRLEKRRGTWQYFYQNLSMIPDEA
TYDVEDVASGDQIGTLDEQFVVNFANPGEVFIQRGEMWRITNVDEDEEVVTVSPIEDPAG
EVPSWVGQEIPVPQAVAREVGELRRVAGRQLQEGAAADAVARDLTRRYEGDPATVESGLE
QLRDHEAPIPDDETIVVEMHGREVVVNACLGHQVNETLGRLLSSLVGQRAGATVAMEVDP
YRIELELPSGVSGGDVIDVLETTDPEHVRHIIELSLKNADALKFKLAQVAAKFGTLKRWR
GSGSGRFGRDRLLAALEDTPIYDEAVREVFHEDLAVEATQTVLSAIQSGSIAVETVGDRT
PIGLGGRSSGRELLSPEHADASVIQTVRERIQNDRVLLFCLHCRDWRRKQQVGRVRDQPD
CPDCGSTRIAALNPWAEEVISAVRAEDKDEDQEKMTERAYRSASLVQSHGKQAVIALAAR
GVGPHNAARIINKLREDEDEFYRDILQQEREYARTQSFW
NT seq 2820 nt   +upstreamnt  +downstreamnt
atgagtgagacgggcgctgacgcgttcactgcactcggcgggtcggtccgatcggcgctg
tccgagcggggttttacgacgccgacggagccccagcgaaaggcgattccgccgctggcg
gcgggagacgacgcgctcgtcgtcgcgccgacggggaccgggaagacggagacggccatg
ctcccggtcttcgacgcgctggccgacgaggaccgctttggcatcggggcgctgtacgtc
acgcccctccgggcgctgaaccgcgacatgcgcgagcggctcgactggtggggcgacgcg
ctcgacctcgagatcgacgtgcgccacggcgacacgaccgactaccagcgccagcagcag
gccgacgatccgccggacgtgctcgtgacgacgccggagacgctccaggcgatgttgacc
ggctcgaagctccggacggcgctggaagacgtggcccacgtcgtcgtcgacgaggtccac
gaactcgcggccgccaagcgcggcgcacagctgaccgtcgggctggaacggctgcgcgag
gtgtcgggccccgtccagcggatcgggctctcggcgaccgtcggtgatccggaggcagtc
gggcgctttctcaccggcgaccgcggctgtcggatcgtcgaggtcgacgtggggagccgt
ctggacgtgtccgtcgtccggccgacggtcaccgacgccgacgagcgcctggccagcgaa
ctcgtcaccgatcccgaagtcgccagccacgtccgccggatcgacgaactgatcgcggcc
cacgactccgtcctggtgttcgtcaacacgcgccagacggcggaggcactgggctcgcgg
ttcaaagaactcggcacgaatctcggggtccaccacggatcgctggccaaggagacgcga
atcgacgtggaagaccgcttcaaggagggcgatctcgacgcgctgctctgtacctcgtcg
atggagctcgggatcgacgtgggccacgtcgaccacgtcgtccagtacgggagcccgcgc
caggtcgctcggctcctccagcgcgtcggccgcgcagggcaccgacgagacctgctgtct
tcggggaccgtcgtcaccacccatccagacgacacgctggaggcgctggcgatcacgcga
caggctctcgacggcgaggtcgagcccgccgagatccacgacggcagcctcgacaccgtg
gccaatcaggtccccggcatcgtcatggacgtcggcgagatccgcgcgatggaggcctac
gagatcgtcacgcgggcgtatcccttccgagacctgacgaccgaggagtttcgggaggtg
gtccgcgaactcgccgagaaccgcgtgctctgggtcgacgaagagaacgaccgactggag
aagcgacgggggacctggcagtacttctatcagaacctctcgatgatccccgacgaggcg
acctacgacgtggaggacgtggcctcgggcgaccagatcggcacgctcgacgagcagttc
gtcgtcaacttcgcgaaccccggcgaggtgttcatccagcgcggggagatgtggcggatc
acgaacgtcgacgaggacgaggaagtcgtcacggtctcgcccatcgaagacccggccggg
gaggtgccgtcgtgggtcggccaggagatcccggtcccacaggcggtcgcccgcgaggtc
ggcgagctgcgacgtgtcgccggcagacagctccaggagggggcagcggccgacgccgtg
gcccgcgatctcacgcggcgctacgagggcgacccggccaccgtcgagagcgggctcgaa
cagctccgagaccacgaggctccgatccccgacgacgagacgatcgtcgtcgagatgcac
ggccgcgaggtcgtcgtcaacgcctgtctgggccaccaggtcaacgagacgctcggccga
ctgctctcgtcgctggtcggtcagcgggccggcgcgaccgtcgcgatggaggtcgatccc
taccggatcgaactcgaactgccaagcggcgtcagcggcggcgacgtgatcgacgtgctg
gagacgaccgatcccgagcacgtccgccacatcatcgagctgagcctgaaaaacgccgac
gcgctgaagttcaagctcgcccaggtcgcggcgaagttcggcacgctcaagcgctggcgg
ggctctggctcgggccggttcgggcgcgatcgactgctggccgccctcgaagacacgccg
atctacgacgaggccgtccgcgaggtgttccacgaggacctggccgtggaagcgacccag
accgtcctgtcggcgattcagtccggctcgatcgccgtcgagaccgtcggcgaccgcacg
ccgatcggcctcggcggccgttcgtccggccgggagctgctctcgccggaacacgccgac
gccagcgtcatccagaccgtcagggagcgcatccagaacgaccgggtgctgctgttctgt
ctccactgtcgagactggcggcgcaaacagcaggtcggtcgcgtccgcgaccagcccgac
tgtcccgactgtgggtcgacgcgcatcgccgcactcaatccgtgggccgaggaggtgatc
tcggcggtgcgagccgaggacaaagacgaggaccaggagaagatgaccgaacgggcctac
cggtcggcgtcgctggtccagagccacggcaaacaggcggtgatcgcgctggccgcgcgc
ggcgtcggcccccacaacgccgctcgcatcatcaacaaactccgcgaggacgaagacgag
ttctaccgggacatcctccagcaggaacgcgagtacgcccgcacccaatcgttctggtga

DBGET integrated database retrieval system