Halomicrobium sp. ZPS1: GBQ70_15870
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Entry
GBQ70_15870 CDS
T07700
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
hazp
Halomicrobium sp. ZPS1
Brite
KEGG Orthology (KO) [BR:
hazp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hazp03400
]
GBQ70_15870
Enzymes [BR:
hazp01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
GBQ70_15870
DNA repair and recombination proteins [BR:
hazp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
GBQ70_15870
Prokaryotic type
GBQ70_15870
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Usp
DUF1707
Motif
Other DBs
NCBI-ProteinID:
QFR21858
LinkDB
All DBs
Position
3089392..3090792
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AA seq
466 aa
AA seq
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MRIHWHRRDLRTTDNAGLAAATADSPVVPVFVFDDAVLDHAAPPRVAFMLDALDSLRAQY
RDRGSDLVIAHGDPTAEIPRLAEAFGADGVTWGEAYSGLGIERDIAVRQALDDVGVEREA
VTDSVHHRPGEITTNDGDPYSVFTYFGRKWHDREKEDPYDAPGPDELADVSGDPLPSVGD
LGFEEPQAEIPPAGTEPARELLDAFCEDDIYRYEDRRDYPADDCTSRLSAHLKFGTIGIR
EVYERTASAAAAADDEERRESVAEFQSQLAWREFYTQVLFANRSVVTDNYKTYERPLQWR
DDPEALQAWKDGETGYPIVDAGMRQLRQEAFVHNRVRMIVASFLTKDLLIDWRAGYEWFK
ERLVDHDTANDNGGWQWAASTGTDAQPYFRIFNPMTQGERYDPDAEYIKTYVPELRDAEP
SVIHEWPDLSLTQRRNAAPEYPDPIVDHSERRDQALEMFETARGES
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgcgaatccactggcatcgacgcgacctccggacgaccgacaacgccggcctggccgca
gcgacggccgacagcccggtcgtgccggtgttcgtcttcgacgacgccgtcctcgaccac
gccgcaccgccccgcgtggcgttcatgctggacgcgctcgactcgctgcgggcacagtac
cgcgaccgcgggagcgacctcgtgatcgctcacggcgatccgacggccgagatcccgcgg
ctggccgaggcgttcggagccgacggcgtgacctggggcgaggcctactccgggctcgga
atcgagcgcgacatcgccgtccggcaggccctcgacgacgtgggcgtcgaacgcgaggcg
gtcaccgattcggttcaccatcgccccggcgagatcacgaccaacgacggcgatccgtac
tcggtgttcacgtacttcgggcgcaagtggcacgaccgggagaaagaggacccctacgac
gcgcccggcccggacgaactggccgacgtgtccggcgatcccctgccgtcggtgggagac
ctggggttcgaggaaccacaggcagagatccctccggcggggacggagccggcccgggag
ctcctcgacgcgttctgcgaggacgacatctatcggtacgaggaccgccgagactacccc
gcagacgactgcacctcacggctctcggctcacctcaagttcgggacgatcggcatcagg
gaggtgtacgagcggaccgcgagcgcggcggcagcggccgacgacgaggaacggcgcgaa
tccgtcgcggagttccagtcgcagttggcctggcgggagttctacacgcaggtcctcttt
gccaaccggtcggtcgtcacggacaactacaagacctacgagcgcccgctccagtggcgc
gacgaccccgaggcgctccaggcctggaaggacggcgagacgggatacccgatcgtcgac
gccgggatgcgccagctccgccaggaggcgttcgtgcacaaccgcgtccggatgatcgtc
gcctcctttctcaccaaggacttgctgatcgactggcgagcgggatacgagtggttcaaa
gagcgtctggtggaccacgacaccgcgaacgacaacggcgggtggcagtgggccgcctcg
acgggaaccgacgcccagccgtacttccggatcttcaatccgatgactcagggcgagcgg
tacgaccccgacgcggagtacatcaagacgtacgtccccgaactgcgtgacgccgagccg
tcggtgatccacgagtggcccgacctctcgctgacccagcgtcgcaacgccgccccggag
taccccgaccccatcgtcgaccacagcgagcggcgcgaccaggctctggagatgttcgag
accgcccgcggcgagagctga
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