Hyalella azteca: 108664282
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Entry
108664282 CDS
T07535
Name
(RefSeq) general transcription factor IIH subunit 1-like
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
hazt
Hyalella azteca
Pathway
hazt03022
Basal transcription factors
hazt03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hazt00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
108664282
09124 Replication and repair
03420 Nucleotide excision repair
108664282
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hazt03021
]
108664282
03400 DNA repair and recombination proteins [BR:
hazt03400
]
108664282
Transcription machinery [BR:
hazt03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
108664282
DNA repair and recombination proteins [BR:
hazt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
108664282
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH_TFIIH
BSD
DUF2969
Cas9_REC
BBL5
Motif
Other DBs
NCBI-GeneID:
108664282
NCBI-ProteinID:
XP_047737140
UniProt:
A0A979FJH7
LinkDB
All DBs
Position
Unknown
AA seq
513 aa
AA seq
DB search
MSDKSEDILLQINDVKYKKNNGQLCIAHKKIGWIMDKTDSFAVSVPYTTIKTQKISPEGK
PKVQLQIILNDQSTHIFHFTNPSGREKQVEERNQVKERLSQLLSASKRQPPNELLEKKRI
LEENPRLHRLYQDLVPKNLLQPEEFWREIAAAYKKNLTPNMEMGISGAFLADIKPQTDGT
NGKVLYNLTPEIMLAVFKTYPAVKKKHDDYVPHRMTESEFWTRFFQSHYYSAHTTSRSEE
VFSECTKYDDKEWSKDLGKIVSDPILNLDNIYETPAYASTQNSSSNAGSNYMHATMIKRF
NQHSQNILKAQTRSEADRLYDEMVAKNPDALTNGTAPPVPQTKNKKVNWRGCRKSCKPAA
AHQLDELNEELSRAVAQWTPDLRSAQNPQLAHKTLQLVSERCREGRADTPHTNGVVEELP
QDLRRDLCAVYSSGGELLRHFWSCFPPRNAQLIAKLHTLHTTLNNYHQATLRPFQEKAIR
DYNCRSGLLDHLVYMFHTANTKYENWKSRYAPR
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgagtgataaatcagaagatattttgcttcagattaatgatgttaagtataaaaaaaat
aatggacaactctgcattgctcataagaagattggatggattatggacaagacagacagt
tttgctgttagtgttccatatacaactatcaagactcaaaagatatctcctgagggtaag
cctaaggtgcaactacaaatcatcctcaatgatcagtcaacgcatatttttcatttcact
aacccaagtggaagagaaaaacaagtggaagagagaaatcaagttaaggaacgtttgtct
caactcctgtctgctagcaaacggcagcctcctaatgagttgctagagaagaaacgaatt
cttgaggagaaccctcggcttcataggctttatcaagaccttgtgcctaagaatctactg
cagcctgaggagttctggagggaaattgctgctgcatacaagaaaaatctaacacctaat
atggagatgggtatttcaggagctttcttggctgacatcaaacctcaaacagatggcacc
aatggcaaggtgctgtacaacttaactcctgagatcatgctggctgtgttcaagacttat
cctgcagtgaagaagaagcatgatgactatgtaccccaccgcatgactgagtccgagttc
tggacaaggttcttccaatcccattactacagcgctcacaccacaagccggtctgaagaa
gtcttttctgagtgtaccaagtatgatgacaaagaatggtccaaggatctagggaagata
gtgagtgatccaatcttaaatctggacaacatctacgagactccagcgtacgcttccact
cagaacagctcgagcaatgcgggcagcaactacatgcatgctaccatgatcaagcggttc
aaccagcacagccaaaacatcctgaaggcccagacgcgttctgaggctgaccgtctctat
gacgagatggtcgccaagaatcctgacgccctcaccaacgggactgctcctcctgtgccg
cagaccaagaacaaaaaagtaaattggcgcggctgcaggaaaagctgtaagcctgcagcc
gctcaccagttggacgagctgaacgaagagctgtcgcgagcagtggcgcagtggacgcct
gacctgcggtctgcgcagaatccccagttggcacacaagacactgcagcttgtgtccgag
aggtgtcgggagggccgcgccgacacgccgcatactaatggcgtggtagaggagctgcca
caggacctgcgtcgtgacctgtgcgcagtgtacagcagcggcggggagctgttacgtcac
ttctggtcctgcttcccgccccgcaacgcgcaactcatcgccaaactccacacactccac
accacactcaacaattaccaccaggccacgctgcggccttttcaggagaaagcaatccgg
gactacaactgccgcagcggcctccttgaccatctggtctacatgttccacaccgccaat
acgaagtatgagaactggaagtctcgctacgcgccaagatga
DBGET
integrated database retrieval system
