Hyalella azteca: 108664415
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Entry
108664415 CDS
T07535
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase PRP1
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
hazt
Hyalella azteca
Pathway
hazt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hazt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108664415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hazt03041
]
108664415
03009 Ribosome biogenesis [BR:
hazt03009
]
108664415
Enzymes [BR:
hazt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
108664415
Spliceosome [BR:
hazt03041
]
Complex A
U2 snRNP components
U2 related factors
108664415
Complex B
108664415
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
108664415
Ribosome biogenesis [BR:
hazt03009
]
Eukaryotic type
90S particles
Helicases
108664415
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
Helicase_C
DEAD
SRP54
AAA_22
AAA_19
Flavi_DEAD
ResIII
nSTAND3
AAA_30
ATPase
ABC_tran
AAA_25
AAA_7
HTH_IclR
NACHT
T2SSE
Motif
Other DBs
NCBI-GeneID:
108664415
NCBI-ProteinID:
XP_018006479
UniProt:
A0A8B7MZU7
LinkDB
All DBs
Position
Unknown
AA seq
717 aa
AA seq
DB search
MPSVKLCSPSLLFFSRQHEDDKHSSSSSSSSKSAALPFNPFTNLPYTPKYYELYRKRIGL
PVWEYRPKFFELMENHQAIVLVGETGSGKTTQMPQWCVEFARKKGKKGVACTQPRRVAAM
SVAQRVAEEMDVSLGQEVGYSIRFEDCSSQRTLLKYMTDGMLLREAMSDPMLENYQVILL
DEAHERTLATDILMGVLKEVLKQRADLKLVVMSATLDAGKFQTYFDGAPLLNVPGRTHPV
EIFFTPEPERDYLEAAIRTVMQIHMCEKVPGDVLLFLTGQEEIEEACKRIKREVEALGTE
VGDLMCIPLYSTLPPNLQQRIFEPAPPNKPNGAFGRKVVVSTNIAETSLTIDGVVFVIDP
GFAKQKVYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTGKAFKNEMQDNTY
PEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALDDEGTLTELG
AVMAEFPLDPQLAKMVIASCEFNCSNEILSITAMLSVQQCFVRPNEAKKAADDAKMRFAH
IDGDHLTLLNVYHAFKQNMEDVQWCYDNFINYRSLKSADNVRQQLSRIMERFSLKRTSTD
FNSRDYYINIRKALVSGFFMQVAHLERTGQYLTIKDNQMVQLHPSTCLDHKPEWVLYNEF
VLTTKNYIRTVTDIKPEWLIKVAPAYYDMGNFPQCEARRQLEAIITKLESKQFREGF
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgccttctgttaaactatgttcaccaagcctcctttttttcagtcggcagcatgaagat
gataagcacagcagctcatcgtcttcatcatccaaaagtgctgcccttccattcaatcca
ttcaccaacctcccctacactccaaaatattatgaactttacagaaagcgtattggtctg
ccagtgtgggagtatcgtccaaagttttttgagttgatggagaaccaccaggctattgtt
cttgttggagagactggctctggaaagacgactcaaatgcctcagtggtgtgttgagttt
gcccgcaagaaaggcaagaaaggagttgcctgcacccaacctcgacgtgtggcagcaatg
tctgttgctcaaagagtagctgaggaaatggatgtatctctgggacaagaagttggctac
tcaattcgttttgaggactgctcatctcaacgcacgctcctcaagtacatgactgatggt
atgttgctcagggaggccatgagtgaccccatgctcgaaaattatcaggttattctgctt
gacgaagctcacgaacgcacgctggcgacagacatcctcatgggcgttctcaaggaggtg
ctcaagcagagagctgatctgaagcttgtcgtcatgtctgctaccctcgatgctggcaag
ttccagacttactttgacggcgctcccctcctgaatgtgccaggccgcactcaccctgtt
gagatcttcttcaccccagagcctgagagagactaccttgaggcagccatccggactgtt
atgcaaattcacatgtgtgagaaagtgccaggcgatgttttgctctttctgacgggccag
gaagaaattgaggaagcatgtaagcgcatcaagcgtgaggtggaagcccttggtactgaa
gtgggtgacctcatgtgcattcctctgtactctacgctgcctcctaacctgcagcagagg
atctttgagcctgcaccacccaacaaacccaatggagcgtttggccgtaaagtcgttgtg
tcaaccaacatcgccgagacttccctcacaattgatggcgttgtttttgtcattgatcct
ggttttgccaagcaaaaggtgtacaatcctcgcattcgtgtggagtcgctgctcgtgtcg
cccatcagcaaggcgtctgctcagcagagagctggccgtgcagggcgcacgcgtcctggc
aaatgcttcaggctctatactggcaaagctttcaagaatgaaatgcaggacaacacatat
cctgagatcctgcgttcaaacctcggctccgtggtgctgcagctcaagaagctcggcatc
gatgatctcgtgcattttgatttcatggatccgcccgcgcccgagacgctgatgcgcgcg
ctggagctcctcaactacctcgctgctctcgacgacgaaggaactcttacggagctgggc
gcggttatggccgagtttccactcgaccctcagctggctaagatggtgattgcctcctgc
gagtttaactgctccaacgaaatcctctcaattacggccatgttatcagttcaacaatgc
ttcgttagaccaaatgaagctaagaaggccgccgatgacgccaaaatgaggttcgcgcac
atcgatggcgatcacctgacgcttctcaacgtctaccacgccttcaaacaaaatatggaa
gacgtgcagtggtgctatgacaacttcatcaactaccgctcgctcaagtctgctgacaac
gttcgccagcagctctcgcgtatcatggagaggttcagcctcaagcgcacctccaccgat
tttaactcgcgcgactactacatcaacatccgcaaggcgctcgtctccggcttcttcatg
caggtcgcacatcttgagcggacggggcagtatctgacgatcaaagataatcaaatggtg
cagctgcatccttctacttgtcttgaccacaagcctgagtgggtgctgtacaacgaattt
gtgctcaccaccaagaactacatccgcaccgtcaccgatatcaaacccgagtggctgatt
aaggtggcccctgcgtactacgacatgggcaacttcccgcagtgcgaggcgcggcgtcaa
ctcgaagccatcatcactaagctggagtcgaagcaattcagggaaggcttttaa
DBGET
integrated database retrieval system
