Hyalella azteca: 108665741
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Entry
108665741 CDS
T07535
Name
(RefSeq) nonsense-mediated mRNA decay factor SMG9
KO
K18735
protein SMG9
Organism
hazt
Hyalella azteca
Brite
KEGG Orthology (KO) [BR:
hazt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hazt03019
]
108665741
Messenger RNA biogenesis [BR:
hazt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
108665741
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NB-ARC
RsgA_GTPase
MMR_HSR1
nSTAND3
Motif
Other DBs
NCBI-GeneID:
108665741
NCBI-ProteinID:
XP_018008021
UniProt:
A0A8B7N2G4
LinkDB
All DBs
Position
Unknown
AA seq
575 aa
AA seq
DB search
MSSFERNSFPRKRGTFPRKSDRELESFLPETMKNPKVFSGHSKSHGYHKPLYSHVSDETD
QKLYCESAKKFSGKQNKENRRNGYSYEDYSGASTEEGDFSTRKIHNAWESEARRSPQPVF
MGAKKIMNPMMKISSETFQTAALDTLPAMPSYMESQRSSPKIVLNRNMKMEEDKEPAKIQ
ILKPNSESTQSSPSSVPVILSRSKPLPEKEFKQPHLLGIEKKSAEREVLRRGAPLTIYDK
GLKPSVFSDLENKVVPSKEMRQPFRLIDLDFKLCEGHTAFNAYLLEQTNFLVVGVIGRQG
VGKSTIASLLLQTKLNPPAGSDRGFRVSGRSELLKGSHCTGGLDVLVTPQRLIVLDFPAL
LAPGAMDTTVGTSDSRIPLEMLVQTRSLQFMALALRVCHVVVVVQDSREQGTELLKCLQA
AAVVNRSDEATGTHTIRSTPDLCGESKPLVSSTVMVVCNKMSSAPPSLQALTFIERHVSR
HLRPGLLNMSSGVGEAPRGTVNLFTLPFIRNCAKERNSLSPSMQTLRSAIMGLERRSFPG
YDSPPTERAWFEYTVRQWEKILKSSLYLDYSRLFP
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgagttcatttgaaagaaattcttttcccaggaaaagaggaacttttccaaggaagtca
gatcgagagttggagagcttcttgccagaaacaatgaaaaatccaaaggttttttctgga
cactcaaaatctcatggctaccataaacctctttactctcatgtatctgatgaaaccgac
caaaaattgtactgtgaatctgctaagaagttctcaggcaagcagaacaaagaaaatagg
cgcaatggatacagctatgaagattacagtggagcatctacagaagaaggggatttcagt
acaaggaaaattcacaatgcttgggagagtgaagcaagaaggtctccccagccagtcttc
atgggagctaaaaagataatgaatccaatgatgaaaattagcagcgagacttttcagact
gctgctttggacactttgcctgccatgccatcttacatggagtcgcaaagatcttctccc
aagattgttcttaatcggaatatgaagatggaagaagacaaagagccagccaaaattcaa
attctgaaacccaattctgaatcaacccagtcaagcccttcttctgtaccagtcattctc
tctcgctctaaacctcttcctgagaaggagttcaaacaaccacatttgcttggcattgag
aagaagagtgccgagcgtgaggtattgcgtagaggagcaccacttaccatctatgacaaa
ggtctcaagccttcagttttcagtgaccttgagaataaagttgtcccatccaaggaaatg
cgtcaaccattccgtctgattgatttagacttcaagctgtgtgagggccacactgcattc
aatgcctaccttctggagcaaaccaacttcctggtggtgggggtgattggcaggcaaggt
gttggcaaaagtactattgcctcactgctgttgcagaccaaactcaaccctccagctggc
agtgaccgtgggtttcgagtaagtggtcgttcagagctgctaaagggtagccactgcacg
ggaggcttggatgttttagtgacgccccagcgtctcatcgtcttggacttccctgccctg
cttgccccaggagccatggacaccaccgtcgggacctctgactcccgcatacctctggag
atgctggtgcagaccaggtcactgcagtttatggcgctggcgctacgtgtctgccacgtc
gtggtcgtcgtgcaagactccagggagcaaggaactgagctgctcaagtgtcttcaggct
gcagctgtcgttaatcgatctgatgaagcaacggggactcacaccatacgctctacaccg
gacttgtgcggagaatcaaagcctctggtaagctccacggtgatggttgtgtgcaacaag
atgtcatcagctcctcccagtctgcaggcgttgaccttcattgagcgccacgtgagccgt
cacctgaggccaggtctgctgaacatgagcagtggtgtgggggaggcgcccagaggaacg
gtcaatctcttcactctgcccttcatccgcaactgcgccaaggagaggaactcgctgtcg
ccctccatgcagacgctgcgatcggccatcatgggcctggagcgcaggagcttccctggc
tatgactcgccgccgactgagcgagcctggtttgagtacacggttcgtcaatgggagaaa
atcctgaagtccagcctctacctggactacagtcgcctgttcccctga
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