Hyalella azteca: 108665758
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Entry
108665758 CDS
T07535
Name
(RefSeq) nuclear pore complex protein Nup50-like
KO
K14295
nuclear pore complex protein Nup50
Organism
hazt
Hyalella azteca
Pathway
hazt03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
hazt00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108665758
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hazt03019
]
108665758
Messenger RNA biogenesis [BR:
hazt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
108665758
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUP50
Ran_BP1
Motif
Other DBs
NCBI-GeneID:
108665758
NCBI-ProteinID:
XP_018008042
UniProt:
A0A6A0H1N8
LinkDB
All DBs
Position
Unknown
AA seq
541 aa
AA seq
DB search
MAKRPAGSDLNRDNWDQDDEPEQQAFGDGAFQRASEEELARRKIKVAKRRSDLVTSDGSD
KPSVFKNFSGFSGMTNASSSATTFDFGAKSSSEPKSEMKKLFEASSFKPSTSIGSSTLPT
FSFSSSTSNKENSKPLESNSTSVNGSASSSELLKKLSGSEGDSNKVFHEKLKLLNEGVLQ
WVHKHVTANCLINLNPVFDDYRKHFDALEKQFMPKFEKSASTSSASSSTVVSSASSSPSL
SSTNVTSPKNANEAAFSVTDSVKPVFSFGGGTDLKPKENPVPGKVDVSKPAFSFMSSTST
NSVPSVTFSESKDKNVRTLDPKQSFPEGVTSGLFCFGSAVAPKSGSGSGGFSLGSGMNFG
AKENTGFSFGGGALSSGAKEGSGFSGFGSKSALTFAPVPPIASESKTEEDEEETPPKPEV
LEVKEENSFYEKKCKLFYKKDGSYADRGVGTLFLKTVGDTKKTQLIMRAATALGNVLLNI
VLNSSLPTQRMGKNNVLIVCVPNPPLDNKEGTDKPVTMLIRVKTSEDADELFKQINDHKG
D
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagcgtcctgctgggtcagacctcaatagggacaactgggaccaagatgatgaa
ccagaacaacaggcatttggtgatggagcttttcagcgcgcgtctgaggaagagttagcc
aggcgcaagatcaaagtagccaagcgtaggtctgacttggtcacttcggatggcagtgac
aagcccagtgtcttcaagaacttctctggcttctctggcatgacgaatgctagcagctct
gcaaccacttttgattttggagctaaaagttcaagtgaaccaaaatctgaaatgaagaag
ctctttgaagcatctagtttcaaaccaagcactagcattggctcttcaacattacctaca
ttcagcttttcttcttctactagcaacaaggagaactctaaacctttagaaagcaattca
acttctgtcaatggatcggcaagctccagcgagttattgaaaaagttatctggcagcgaa
ggagacagtaacaaagtatttcatgagaaattgaagttattgaatgaaggtgtactgcag
tgggttcacaagcacgtaacggccaattgtctcatcaatttaaatcctgtctttgatgac
tacagaaaacactttgatgctctagaaaaacaatttatgcctaaatttgagaagagtgca
agtacttcttctgcttcatcatctaccgttgtttcgagtgcctcaagttctccttcgtta
tcttccactaatgtaacatcaccaaagaacgccaatgaagctgcgttttctgtgactgat
agtgtaaaaccggtgttctcttttggaggaggaactgacttgaaaccgaaagagaatcca
gttcctggaaaagtagatgtctcgaagcctgctttttcattcatgtcttccacgtcaacc
aattctgttccatctgtaactttcagcgaatcgaaggataaaaatgtcaggactctagat
cctaagcaatcatttcctgaaggagttacttctggacttttttgctttggttcagcagta
gctcccaagtctggcagcggcagtggaggtttctcattaggttcaggaatgaattttgga
gcaaaagagaacactggattctcatttggcggaggtgccttgtcctcgggagctaaggaa
ggctctggtttctctggctttggatcaaaaagcgccttgacttttgcacctgtaccacca
atagcctccgagtccaaaacggaagaagatgaagaagaaacgccacccaaacccgaagtg
ctggaggtcaaggaagagaactccttctatgaaaagaagtgcaaacttttctacaagaaa
gatggaagctacgctgacaggggagttgggactctcttcctgaagacggtcggtgacacc
aagaagacgcagctcatcatgcgggctgcaacggctctaggcaatgttttgctaaacatt
gttttgaattcttctcttcctacacagaggatgggtaagaacaacgtcctcattgtgtgc
gtgcccaacccaccgttggataacaaggaaggaacagataaaccggtcacaatgctcatc
agggtcaagacttctgaagacgctgatgaactttttaaacaaatcaatgaccataaagga
gattag
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