Hyalella azteca: 108666253
Help
Entry
108666253 CDS
T07535
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPB
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
hazt
Hyalella azteca
Pathway
hazt03022
Basal transcription factors
hazt03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hazt00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
108666253
09124 Replication and repair
03420 Nucleotide excision repair
108666253
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hazt03021
]
108666253
03400 DNA repair and recombination proteins [BR:
hazt03400
]
108666253
Enzymes [BR:
hazt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
108666253
Transcription machinery [BR:
hazt03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
108666253
DNA repair and recombination proteins [BR:
hazt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
108666253
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
AAA_34
TniB
AAA_22
Motif
Other DBs
NCBI-GeneID:
108666253
NCBI-ProteinID:
XP_018008577
UniProt:
A0A8B7N3Z5
LinkDB
All DBs
Position
Unknown
AA seq
789 aa
AA seq
DB search
MGKKSKNFDKGKKRRRDDSDDDDLDDLEGIPQASTQNVEERSLVDIPKDEFGAQDFRSIM
ELRDDHNSRPLWVAPNGHIFLEAFSPVYKHAKDFLITIAEPVCRPEHIHEYKLTAYSLYA
AVSVGLQTNDIVDYLKRLSKTTLPSGICDFIEACTLSYGKVKLVLKRNRYYVESDFPDVI
QTLIKNAAIQECMLRPDEGLVSTEKQKVSSIVFTSHQGQMAGETQDTTTLDQNGEPKDDL
VPEDIASFYDKIDKADDEEEEDKDLKTLSFEITQDKIELLQKTCIGLDYPLLAEYDFKND
TVNDDIKIDLKPSAVLRPYQEKSLRKMFGNGRARSGIIVLPCGAGKSLVGVTACCTVNKK
ALVLCNSGVSVEQWKQQFKMWSTATDDMICRFTSDAKDKPYNAGILVTTYAMISHQQKRA
YEAEQTMQWLKEQEWGIMVLDEVHTIPAKMFRRVLTIVQAHCKLGLTATLVREDDKIADL
NFLIGPKLYEANWLELQKEGFIAKVQCAEVWCPMTPEFYKEYLTGKVSDQKIKLLCAMNP
NKFRTCQFLIKYHEQRCDKIIVFIDEVFALRHYAMAMNKPFICGKTSQKERMMIIQNFKL
NPKVNTIFFSRVADTSFDIPEANVLIEISSQGGSRRQEAQRLGRILRAKKSAVAENFNAF
FYALLSQDTREMGYSRKRQSFLINQGYAYQVITPNKLTGYDKEELLYSSKEDKLGLLESI
LAAAESDLYEEGVTELGGKPAPSGGGAAFQRRPGSMASVSGGDDAIYAERRKHVPNKEHK
HALFKKFRS
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgggaaagaagagcaaaaactttgacaaaggaaagaaaagaagaagagatgactctgat
gatgacgatcttgatgacctagaaggcattcctcaggcatccactcaaaatgtggaggag
cgaagcctggttgacatcccaaaggatgaatttggtgcacaagattttcgtagcatcatg
gaattaagggatgaccacaacagtcgcccgctgtgggtagcaccaaacggtcatattttc
ctggaagctttctcgcctgtctacaaacatgccaaagactttctcatcacgattgcagag
cctgtgtgtcgtcctgagcacattcatgaatataaactgacagcatactctctgtatgcg
gcggtgagtgttggcctccaaactaacgacatagttgactacctcaaacgtctcagtaag
accactctgccctcaggcatatgcgacttcattgaggcgtgcaccctgtcttatggtaaa
gtgaagctggtactaaaacgtaacagatattacgttgaaagcgactttccagatgttatt
cagaccctcattaaaaacgcggccatacaggagtgcatgttgcgtcccgatgagggtttg
gtgtccactgagaagcagaaggtttcatccatcgtgttcacgagtcaccaggggcagatg
gccggtgagacgcaggatactacgacccttgaccaaaacggtgagcctaaggatgatctc
gtacctgaagacattgctagcttctatgataagatcgataaagctgatgatgaagaagag
gaagacaaagatctgaaaactttatcgtttgaaatcactcaagataagattgaactgttg
cagaagacttgcattgggttagattatcctcttttggccgaatacgactttaagaatgac
actgtgaatgacgacatcaagattgatctaaagcctagtgctgtgctacgaccttaccag
gagaagtcgctcagaaagatgttcgggaacggccgagcgcggtcaggtattattgtcttg
ccctgcggtgctggcaagagtttggttggtgtcactgcctgctgcactgtcaacaaaaag
gctttggtgctatgtaattctggcgtgtcagttgagcaatggaagcagcaattcaagatg
tggtccactgctacggatgatatgatttgtcggttcacttcagatgctaaagataagccc
tacaatgccggcattctcgtcacgacatatgccatgatttcacatcaacaaaagcgcgcg
tacgaagctgagcaaacaatgcaatggctcaaagagcaggagtggggcatcatggtgttg
gatgaggtgcacaccatcccggccaaaatgttcaggcgagtgctcactatcgtacaggcc
cattgtaagctcggcctcacagccacgcttgtcagagaagatgacaagatcgccgacctc
aacttcttgataggtcccaagctgtatgaggccaactggctcgagctgcagaaggaaggc
ttcattgcaaaggttcagtgcgctgaagtgtggtgtccgatgactcctgaattctacaag
gaatatctcactggcaaagtttctgatcaaaaaatcaagcttctttgtgcaatgaatccc
aataaattccgaacctgtcagttcttgataaaatatcacgaacaacgatgtgataaaatc
attgtttttatcgatgaagtttttgcattgaggcattatgccatggccatgaataagcct
ttcatctgcggtaaaaccagccaaaaggagagaatgatgatcattcaaaacttcaagttg
aaccctaaagtcaacacaatattctttagtcgtgttgctgacacgtcttttgacattccg
gaagcgaacgtgcttatagaaatttcatcacaaggaggatctcgacgtcaggaggcccag
agactgggtcgcattttgcgtgccaagaaaagcgccgtcgctgagaatttcaacgccttc
ttctacgcactgctgtcgcaggacaccagagagatgggctactcacgcaagcgtcagagc
ttcctcatcaaccaaggctatgcttaccaagtcatcactcccaacaaactcacgggctat
gacaaggaagagcttttgtattcttctaaagaggacaaactcggtctactagagagtatc
ttggctgcagctgaaagcgacctgtacgaagaaggcgtcactgaattgggaggaaaacca
gctccctcaggaggcggcgctgcgttccagcgtcgccctggcagcatggcgagcgtgtcg
ggtggcgatgacgccatctacgccgagcgtcgcaaacacgtccccaacaaggaacacaag
catgcgctcttcaagaagttcagaagctag
DBGET
integrated database retrieval system
