Hyalella azteca: 108666468
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Entry
108666468 CDS
T07535
Name
(RefSeq) collagen alpha-5(IV) chain
KO
K06237
collagen type IV alpha
Organism
hazt
Hyalella azteca
Pathway
hazt04382
Cornified envelope formation
hazt04512
ECM-receptor interaction
hazt04518
Integrin signaling
hazt04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
hazt00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
108666468
04518 Integrin signaling
108666468
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
108666468
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
108666468
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hazt04147
]
108666468
00536 Glycosaminoglycan binding proteins [BR:
hazt00536
]
108666468
Exosome [BR:
hazt04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
108666468
Glycosaminoglycan binding proteins [BR:
hazt00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
108666468
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
108666468
NCBI-ProteinID:
XP_018008840
UniProt:
A0A8B7N5F8
LinkDB
All DBs
Position
Unknown
AA seq
1738 aa
AA seq
DB search
MKASVILLVGLLGAAQRAQADCCVSRPCRCDDPGPPGAPGLPGLQGHTGFPGDPGYEGPT
GQPGPYGDTGDPGSMGPKGSRGDQGMPGFKGTAGIPGLPGSQGIRGALGIPGCNGTDGRP
GAPGYPGPAGLPGPEGPKGVPGFKGDSGEGGINSPGARGESGTPGLAGVQGIRGMKGNKG
YPGPEGIRGLQGSPGRPGWDGPKGDPGDPGGLVEAMKGDMGERGPDGSPPDYELTGPQGP
AGLPGFQGDRGRDGYPGGGGNRGLPGEPGPPGPAGDPGRQGISPPGDPGIQGFPGVPGIQ
GPRGDVGPPGFAGRKGFVGDPDFGAKGRDGRPGRAGVNGLQGQQGDAGRPGLKGIPGLGV
PIKGPKGFKGFMGPTGDPGFSPRDAPNGVPGIKGPTGDACIPRPQSPCLPGERGDPGYPG
SPGFKGEPGFPGPAGRKGIAGNVGLAGNRGPDGIAGSNGLSGYAGRKGEPGSLIPGPALP
GVRGDPGFPGPIGDAGPRGPQGRPGADGRVGAAGEQNRGYQGQAGPKGIKGAAGGFFTLE
AERGDPGPAGYPGRPGNPGPVGIRGPKGVRGNVGTPGPKMDGLTGLKGYPGIVGAPGFRG
QIGAQGAQGDPGIDGTPGDKGDAGDAGRSDVAGPPGQPGLPGSKGETGDQGFPGAKGFYG
YPGTVGPRGPKGIAGLPGINGRKGQRGNQGISVPGERGPPGDQGFNGFPGFPGNPGQIGM
SGLPGQRGFPGRKGEPGIYGSVGAPGDPGFDGRPGALGQPGRHGAYGVKGQPGDGGFRGR
PGLAGDPGTDGAIGPRGDFGPEGIPGNRGFDGNPGPKGQPGDIGPQGYRGAPGLSGIFSG
HGDPGVQGDPGAPGQDGPQGRVGRIGAPGPDGRAFPGPKGPKGIPGDPGRAGAPGFNGLK
GLPGDAGTPGATGEPGVRGDVGFPGLPGIVTFALPGPAGPQGPKGMSGDPGFFGLAGTPG
DRGFPGTPGAPGPQGAVGERGPTGPSGFGNKGDMGEPGRPQDPGPPGPPGTPGADGTKGA
RGDDGFPGIRGPDGFPGQSGDPGTAGPPGPPGLPGTPTGRGPPGADGWPGQDGIPGRPGQ
KGRPGDFGPTGPIGAPGLPGLTFPGQRGDPGFRGPVGLPGRPGRSGLDGRPGLQGRPGDQ
KGERGDAGYPGPPGPKGLPGPPGPEQLRDGSKGAKGAPGEAGLPGLPGAHGARGSAGAVG
YSGPDGLPGYKGERGIPGLAGAPGFKGATGIRGLVGLAGAPGIPGFMGDPGVGGPVGFPG
QRGDDGRFGAVGLPGLLGLRGDVGAPGYAGAPGPAGYPGPAGVPAPPAPGPRSRGYLLTR
HSQTVEVPRCPLGMPPMWEGYSLLHVMGDGRAQSQDLGAPGSCLRKFSTMPYLFCNPNNV
CDFAQRGDYSYWLSTPEPMPMMMNPITGPEIEKYISKCVVCEAPSSVIALHSQSVDIPDC
PPNWDSLWIGYSFIMHTDAGAEGGGQNLMSPGSCIEDFRPTPFIECHGHGRCNYFTTAIS
YWMATIELRDQFSRPRQQTLKAGDLKTRVSRCNVCSRSAVVVTGNEVQPNMEPFMLEESK
KDAMMEYEGGFMKGSNAQYGGVFGSSGSSSSGFGGFGTSGTSFGAQGGRNGGGGYGYGGQ
GGGYGGLESGYGTGGQGGGYGGLESGYSGGQGGGYGGVESGYSGGQGGGYGGVESGYGTG
GQGGGYGGYGNYGTNGEYTGYSYGTDGGSGYELFTGEAVPASAIQRRPAARRTGSRAG
NT seq
5217 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcgtcagtcatcttgctggtcgggctgctgggcgctgctcagcgtgcccaggcc
gactgctgtgtgtcccgcccctgccgctgcgacgacccgggcccaccgggggcgccgggc
ctcccgggcctgcagggccacacgggcttccctggagacccgggctacgagggccccacg
ggtcagcccgggccctatggggacacgggggaccccggcagtatgggccccaaagggtcc
cgcggggaccaagggatgccgggcttcaaggggaccgcgggcatcccgggcctgcccggg
tcgcagggcatccgcggggccctcggcatcccggggtgcaacgggaccgacggccggccc
ggggccccgggctatccgggcccagcgggcctaccgggccctgaaggccccaagggggtg
ccggggttcaagggggactcgggggagggggggatcaactcccccggggcgcggggggag
agcggcaccccgggcctcgcgggggtccagggcatccgcgggatgaagggcaacaagggc
tacccgggccccgagggcatacgggggctgcagggttcaccgggtcggcctggttgggac
gggcccaagggagaccccggggacccggggggactagtggaggccatgaagggggacatg
ggggagcgggggcccgacggcagccccccggactacgagctcacagggccccagggcccc
gcggggctgccgggcttccaaggagaccgcgggcgggatggctacccgggcggagggggc
aaccggggcctgcccggcgagcccggaccccccggacccgcgggagacccgggccgacaa
gggatcagccctccgggggaccctggcatacaagggttcccgggcgtcccaggcatccag
ggcccacggggggacgtgggccccccggggttcgcgggtcgtaaagggttcgtcggggac
cccgactttggggccaagggtcgggacggcagaccgggccgcgcgggggtcaacggtctt
cagggtcaacagggcgacgcgggccggccaggtctcaagggcataccgggcctcggtgtc
cccatcaagggccccaagggcttcaagggcttcatgggccccacgggggacccgggattc
agcccccgggacgcccccaacggggtcccgggcatcaagggccccacgggcgacgcctgc
atcccgcggccccagtccccatgcctccccggagagcggggggacccggggtacccaggc
agcccggggttcaaaggggagcccgggttcccgggccccgcgggcaggaagggcatcgcg
gggaacgtgggcctcgcgggcaaccgcgggcccgacggtatcgcgggatcaaacggcctc
tctgggtacgcggggcgcaagggggagccaggctccctaatcccgggccccgcactgccc
ggggtcaggggagacccaggcttcccgggccccattggtgacgccgggcctcgagggcct
caggggcggcccggcgctgatggacgagtgggcgccgcaggcgagcagaataggggctac
caagggcaggcgggcccaaagggcatcaagggcgcggccggcggtttcttcaccttagag
gcagagcgcggggaccctggacccgcaggttaccctggaaggcccggcaaccctgggccc
gttgggatccggggccccaagggcgtgcgaggcaatgtggggacacctgggcccaagatg
gacgggctgacgggcctcaagggctacccaggaatcgttggggccccaggcttcagggga
cagattggggcccaaggggcccaaggcgacccaggcattgacgggacccccggggacaaa
ggagacgctggggacgcgggacgttcagacgtggcgggcccaccgggacagccgggcctc
cctggctctaaaggggagactggggaccaaggcttccccggggccaaggggttctatggc
tacccgggaaccgtggggcccagggggcccaagggcatcgctggattacctgggattaac
ggcaggaagggtcaacgcggcaaccagggcatcagcgtccccggggagaggggaccgcca
ggggaccaagggttcaacggctttccagggttccctggcaaccccggccagatagggatg
tcagggttgccgggccaaagagggttcccgggtcggaagggggagcctgggatatacggc
agcgtcggggccccaggagacccagggttcgacggacgacccggggccttgggacaaccg
ggacgtcatggggcctacggcgtcaagggacagcctggagatggcgggttcagaggacgc
ccggggcttgccggggaccctgggactgacggggccatcgggccacgaggagattttgga
ccggaaggcataccagggaaccgaggctttgacggaaacccgggccccaagggccaaccc
ggagacatcggaccccagggttaccgcggggccccgggactgtcggggatcttctcgggc
cacggcgacccgggggtgcaaggtgaccctggtgctccgggccaggatgggccccaagga
cgtgtgggacgcatcggggccccgggtcctgatggtcgcgccttcccgggcccaaaaggg
cccaaaggcatcccgggcgaccccggccgagccggcgccccagggtttaacggattaaag
ggcctccctggggacgcgggcaccccgggggcgacgggggagccgggggtgcggggggac
gtgggcttccccggcctccccggcatcgtgacgttcgctttgcccggacccgcggggccc
cagggccccaagggcatgagtggggacccaggcttctttggcctcgcaggcacccccggc
gaccgcgggttccccggcacgcctggagcccccgggccacagggagccgtcggagagcga
ggccccacggggccctcaggattcggcaacaagggcgacatgggcgagccagggaggccc
caggacccgggcccaccgggcccccccgggacacccggcgccgacggcaccaagggggcg
cggggggacgacggtttccccggcatacggggccccgatggctttccgggacagtctgga
gaccctgggaccgcgggcccaccgggcccacccggcctccccggcacccccacggggcgc
gggccccccggggctgatggatggcccggacaggacgggatcccgggtagaccgggccag
aagggccgaccgggtgacttcgggcccacagggcccattggggccccgggccttcccggc
ctaacattccccggacagagaggggaccccggcttccgagggcccgtggggctcccgggc
cggccgggccgcagcgggctggacggcagaccgggcctgcagggcagacccggggaccag
aagggggagcggggggacgcgggctaccccggcccaccaggacccaagggtctaccgggt
ccaccgggaccagaacagctgcgggacggcagcaagggggccaagggcgccccgggcgaa
gcgggcctgccaggactgcccggggcccacggggcccgcgggtcagcaggggctgtagga
tacagcgggcccgatggcctcccgggctacaagggtgaacgtggcatcccgggcctcgcg
ggggccccaggcttcaagggcgccacggggatcagaggccttgtgggcctcgcgggagcc
ccaggcatccccgggttcatgggtgaccccggggttgggggacccgtagggttcccggga
cagcggggtgatgatggcaggttcggcgccgtgggcctgccgggactactgggcctacgg
ggcgacgtcggggccccgggatacgctggggcccccgggcctgctggttaccccggcccc
gcgggtgtgccagctcccccagccccgggcccgcggtcccgtgggtacctgctcacccgg
cacagccagacggtggaggtcccccgctgccccctggggatgccccccatgtgggagggc
tactccctcctgcacgtcatgggggacggccgcgcccagagccaggacctgggagcccca
gggtcgtgtctgcgcaagttcagcaccatgccctacctcttctgtaaccccaacaacgtc
tgcgacttcgcgcagcggggcgactactcctactggctgtccacccccgagcccatgccc
atgatgatgaaccccatcaccgggccagagatcgagaagtacatctccaagtgcgtggta
tgcgaggccccctcttcggttatcgccctgcacagccagagcgtcgacatccccgactgc
ccccccaactgggacagcctctggatcggctactccttcatcatgcacactgacgcaggc
gctgaaggaggcggccaaaacctgatgtccccaggctcctgcattgaagacttcagaccg
acgcccttcatcgagtgccacggtcacggcagatgcaactacttcaccaccgctatcagc
tactggatggccaccatcgagctccgggaccagttctctagaccccggcagcagaccctg
aaggcgggcgacctcaagacccgcgtcagcaggtgcaacgtctgcagcagaagtgcggtg
gtcgtaacgggcaatgaagttcagcctaacatggagcccttcatgctggaagagagtaag
aaggacgccatgatggagtatgaaggagggttcatgaagggctccaacgcccagtacgga
ggggtcttcggcagtagtgggtcctcttcctctgggttcggggggttcgggaccagcggg
accagtttcggggcccaaggaggtagaaatggtggaggtggatatgggtatggtggacaa
ggaggtggatacggaggacttgagtcaggatatggcactggtggacaaggaggcggatac
ggaggacttgagtcaggatacagtggtggacaaggaggtggatacggaggagttgagtca
ggatacagtggtggacaaggaggtggttacggaggagttgagtcaggttacggtactggc
ggacaaggaggtggatacggtggctatggcaattacggcacaaatggcgaatacacggga
tacagttacggcactgacggaggaagtggatacgaattgtttacgggagaagctgtgccg
gcgagcgccatacagcggagacccgcggccaggagaactggaagcagggcggggtag
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integrated database retrieval system