Hyalella azteca: 108666468
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Entry
108666468 CDS
T07535
Name
(RefSeq) collagen alpha-5(IV) chain
KO
K06237
collagen type IV alpha
Organism
hazt
Hyalella azteca
Pathway
hazt04512
ECM-receptor interaction
hazt04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
hazt00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
108666468
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
108666468
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hazt04147
]
108666468
00536 Glycosaminoglycan binding proteins [BR:
hazt00536
]
108666468
Exosome [BR:
hazt04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
108666468
Glycosaminoglycan binding proteins [BR:
hazt00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
108666468
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
108666468
NCBI-ProteinID:
XP_018008840
UniProt:
A0A8B7N5F8
LinkDB
All DBs
Position
Unknown
AA seq
1738 aa
AA seq
DB search
MKASVILLVGLLGAAQRAQADCCVSRPCRCDDPGPPGAPGLPGLQGHTGFPGDPGYEGPT
GQPGPYGDTGDPGSMGPKGSRGDQGMPGFKGTAGIPGLPGSQGIRGALGIPGCNGTDGRP
GAPGYPGPAGLPGPEGPKGVPGFKGDSGEGGINSPGARGESGTPGLAGVQGIRGMKGNKG
YPGPEGIRGLQGSPGRPGWDGPKGDPGDPGGLVEAMKGDMGERGPDGSPPDYELTGPQGP
AGLPGFQGDRGRDGYPGGGGNRGLPGEPGPPGPAGDPGRQGISPPGDPGIQGFPGVPGIQ
GPRGDVGPPGFAGRKGFVGDPDFGAKGRDGRPGRAGVNGLQGQQGDAGRPGLKGIPGLGV
PIKGPKGFKGFMGPTGDPGFSPRDAPNGVPGIKGPTGDACIPRPQSPCLPGERGDPGYPG
SPGFKGEPGFPGPAGRKGIAGNVGLAGNRGPDGIAGSNGLSGYAGRKGEPGSLIPGPALP
GVRGDPGFPGPIGDAGPRGPQGRPGADGRVGAAGEQNRGYQGQAGPKGIKGAAGGFFTLE
AERGDPGPAGYPGRPGNPGPVGIRGPKGVRGNVGTPGPKMDGLTGLKGYPGIVGAPGFRG
QIGAQGAQGDPGIDGTPGDKGDAGDAGRSDVAGPPGQPGLPGSKGETGDQGFPGAKGFYG
YPGTVGPRGPKGIAGLPGINGRKGQRGNQGISVPGERGPPGDQGFNGFPGFPGNPGQIGM
SGLPGQRGFPGRKGEPGIYGSVGAPGDPGFDGRPGALGQPGRHGAYGVKGQPGDGGFRGR
PGLAGDPGTDGAIGPRGDFGPEGIPGNRGFDGNPGPKGQPGDIGPQGYRGAPGLSGIFSG
HGDPGVQGDPGAPGQDGPQGRVGRIGAPGPDGRAFPGPKGPKGIPGDPGRAGAPGFNGLK
GLPGDAGTPGATGEPGVRGDVGFPGLPGIVTFALPGPAGPQGPKGMSGDPGFFGLAGTPG
DRGFPGTPGAPGPQGAVGERGPTGPSGFGNKGDMGEPGRPQDPGPPGPPGTPGADGTKGA
RGDDGFPGIRGPDGFPGQSGDPGTAGPPGPPGLPGTPTGRGPPGADGWPGQDGIPGRPGQ
KGRPGDFGPTGPIGAPGLPGLTFPGQRGDPGFRGPVGLPGRPGRSGLDGRPGLQGRPGDQ
KGERGDAGYPGPPGPKGLPGPPGPEQLRDGSKGAKGAPGEAGLPGLPGAHGARGSAGAVG
YSGPDGLPGYKGERGIPGLAGAPGFKGATGIRGLVGLAGAPGIPGFMGDPGVGGPVGFPG
QRGDDGRFGAVGLPGLLGLRGDVGAPGYAGAPGPAGYPGPAGVPAPPAPGPRSRGYLLTR
HSQTVEVPRCPLGMPPMWEGYSLLHVMGDGRAQSQDLGAPGSCLRKFSTMPYLFCNPNNV
CDFAQRGDYSYWLSTPEPMPMMMNPITGPEIEKYISKCVVCEAPSSVIALHSQSVDIPDC
PPNWDSLWIGYSFIMHTDAGAEGGGQNLMSPGSCIEDFRPTPFIECHGHGRCNYFTTAIS
YWMATIELRDQFSRPRQQTLKAGDLKTRVSRCNVCSRSAVVVTGNEVQPNMEPFMLEESK
KDAMMEYEGGFMKGSNAQYGGVFGSSGSSSSGFGGFGTSGTSFGAQGGRNGGGGYGYGGQ
GGGYGGLESGYGTGGQGGGYGGLESGYSGGQGGGYGGVESGYSGGQGGGYGGVESGYGTG
GQGGGYGGYGNYGTNGEYTGYSYGTDGGSGYELFTGEAVPASAIQRRPAARRTGSRAG
NT seq
5217 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcgtcagtcatcttgctggtcgggctgctgggcgctgctcagcgtgcccaggcc
gactgctgtgtgtcccgcccctgccgctgcgacgacccgggcccaccgggggcgccgggc
ctcccgggcctgcagggccacacgggcttccctggagacccgggctacgagggccccacg
ggtcagcccgggccctatggggacacgggggaccccggcagtatgggccccaaagggtcc
cgcggggaccaagggatgccgggcttcaaggggaccgcgggcatcccgggcctgcccggg
tcgcagggcatccgcggggccctcggcatcccggggtgcaacgggaccgacggccggccc
ggggccccgggctatccgggcccagcgggcctaccgggccctgaaggccccaagggggtg
ccggggttcaagggggactcgggggagggggggatcaactcccccggggcgcggggggag
agcggcaccccgggcctcgcgggggtccagggcatccgcgggatgaagggcaacaagggc
tacccgggccccgagggcatacgggggctgcagggttcaccgggtcggcctggttgggac
gggcccaagggagaccccggggacccggggggactagtggaggccatgaagggggacatg
ggggagcgggggcccgacggcagccccccggactacgagctcacagggccccagggcccc
gcggggctgccgggcttccaaggagaccgcgggcgggatggctacccgggcggagggggc
aaccggggcctgcccggcgagcccggaccccccggacccgcgggagacccgggccgacaa
gggatcagccctccgggggaccctggcatacaagggttcccgggcgtcccaggcatccag
ggcccacggggggacgtgggccccccggggttcgcgggtcgtaaagggttcgtcggggac
cccgactttggggccaagggtcgggacggcagaccgggccgcgcgggggtcaacggtctt
cagggtcaacagggcgacgcgggccggccaggtctcaagggcataccgggcctcggtgtc
cccatcaagggccccaagggcttcaagggcttcatgggccccacgggggacccgggattc
agcccccgggacgcccccaacggggtcccgggcatcaagggccccacgggcgacgcctgc
atcccgcggccccagtccccatgcctccccggagagcggggggacccggggtacccaggc
agcccggggttcaaaggggagcccgggttcccgggccccgcgggcaggaagggcatcgcg
gggaacgtgggcctcgcgggcaaccgcgggcccgacggtatcgcgggatcaaacggcctc
tctgggtacgcggggcgcaagggggagccaggctccctaatcccgggccccgcactgccc
ggggtcaggggagacccaggcttcccgggccccattggtgacgccgggcctcgagggcct
caggggcggcccggcgctgatggacgagtgggcgccgcaggcgagcagaataggggctac
caagggcaggcgggcccaaagggcatcaagggcgcggccggcggtttcttcaccttagag
gcagagcgcggggaccctggacccgcaggttaccctggaaggcccggcaaccctgggccc
gttgggatccggggccccaagggcgtgcgaggcaatgtggggacacctgggcccaagatg
gacgggctgacgggcctcaagggctacccaggaatcgttggggccccaggcttcagggga
cagattggggcccaaggggcccaaggcgacccaggcattgacgggacccccggggacaaa
ggagacgctggggacgcgggacgttcagacgtggcgggcccaccgggacagccgggcctc
cctggctctaaaggggagactggggaccaaggcttccccggggccaaggggttctatggc
tacccgggaaccgtggggcccagggggcccaagggcatcgctggattacctgggattaac
ggcaggaagggtcaacgcggcaaccagggcatcagcgtccccggggagaggggaccgcca
ggggaccaagggttcaacggctttccagggttccctggcaaccccggccagatagggatg
tcagggttgccgggccaaagagggttcccgggtcggaagggggagcctgggatatacggc
agcgtcggggccccaggagacccagggttcgacggacgacccggggccttgggacaaccg
ggacgtcatggggcctacggcgtcaagggacagcctggagatggcgggttcagaggacgc
ccggggcttgccggggaccctgggactgacggggccatcgggccacgaggagattttgga
ccggaaggcataccagggaaccgaggctttgacggaaacccgggccccaagggccaaccc
ggagacatcggaccccagggttaccgcggggccccgggactgtcggggatcttctcgggc
cacggcgacccgggggtgcaaggtgaccctggtgctccgggccaggatgggccccaagga
cgtgtgggacgcatcggggccccgggtcctgatggtcgcgccttcccgggcccaaaaggg
cccaaaggcatcccgggcgaccccggccgagccggcgccccagggtttaacggattaaag
ggcctccctggggacgcgggcaccccgggggcgacgggggagccgggggtgcggggggac
gtgggcttccccggcctccccggcatcgtgacgttcgctttgcccggacccgcggggccc
cagggccccaagggcatgagtggggacccaggcttctttggcctcgcaggcacccccggc
gaccgcgggttccccggcacgcctggagcccccgggccacagggagccgtcggagagcga
ggccccacggggccctcaggattcggcaacaagggcgacatgggcgagccagggaggccc
caggacccgggcccaccgggcccccccgggacacccggcgccgacggcaccaagggggcg
cggggggacgacggtttccccggcatacggggccccgatggctttccgggacagtctgga
gaccctgggaccgcgggcccaccgggcccacccggcctccccggcacccccacggggcgc
gggccccccggggctgatggatggcccggacaggacgggatcccgggtagaccgggccag
aagggccgaccgggtgacttcgggcccacagggcccattggggccccgggccttcccggc
ctaacattccccggacagagaggggaccccggcttccgagggcccgtggggctcccgggc
cggccgggccgcagcgggctggacggcagaccgggcctgcagggcagacccggggaccag
aagggggagcggggggacgcgggctaccccggcccaccaggacccaagggtctaccgggt
ccaccgggaccagaacagctgcgggacggcagcaagggggccaagggcgccccgggcgaa
gcgggcctgccaggactgcccggggcccacggggcccgcgggtcagcaggggctgtagga
tacagcgggcccgatggcctcccgggctacaagggtgaacgtggcatcccgggcctcgcg
ggggccccaggcttcaagggcgccacggggatcagaggccttgtgggcctcgcgggagcc
ccaggcatccccgggttcatgggtgaccccggggttgggggacccgtagggttcccggga
cagcggggtgatgatggcaggttcggcgccgtgggcctgccgggactactgggcctacgg
ggcgacgtcggggccccgggatacgctggggcccccgggcctgctggttaccccggcccc
gcgggtgtgccagctcccccagccccgggcccgcggtcccgtgggtacctgctcacccgg
cacagccagacggtggaggtcccccgctgccccctggggatgccccccatgtgggagggc
tactccctcctgcacgtcatgggggacggccgcgcccagagccaggacctgggagcccca
gggtcgtgtctgcgcaagttcagcaccatgccctacctcttctgtaaccccaacaacgtc
tgcgacttcgcgcagcggggcgactactcctactggctgtccacccccgagcccatgccc
atgatgatgaaccccatcaccgggccagagatcgagaagtacatctccaagtgcgtggta
tgcgaggccccctcttcggttatcgccctgcacagccagagcgtcgacatccccgactgc
ccccccaactgggacagcctctggatcggctactccttcatcatgcacactgacgcaggc
gctgaaggaggcggccaaaacctgatgtccccaggctcctgcattgaagacttcagaccg
acgcccttcatcgagtgccacggtcacggcagatgcaactacttcaccaccgctatcagc
tactggatggccaccatcgagctccgggaccagttctctagaccccggcagcagaccctg
aaggcgggcgacctcaagacccgcgtcagcaggtgcaacgtctgcagcagaagtgcggtg
gtcgtaacgggcaatgaagttcagcctaacatggagcccttcatgctggaagagagtaag
aaggacgccatgatggagtatgaaggagggttcatgaagggctccaacgcccagtacgga
ggggtcttcggcagtagtgggtcctcttcctctgggttcggggggttcgggaccagcggg
accagtttcggggcccaaggaggtagaaatggtggaggtggatatgggtatggtggacaa
ggaggtggatacggaggacttgagtcaggatatggcactggtggacaaggaggcggatac
ggaggacttgagtcaggatacagtggtggacaaggaggtggatacggaggagttgagtca
ggatacagtggtggacaaggaggtggttacggaggagttgagtcaggttacggtactggc
ggacaaggaggtggatacggtggctatggcaattacggcacaaatggcgaatacacggga
tacagttacggcactgacggaggaagtggatacgaattgtttacgggagaagctgtgccg
gcgagcgccatacagcggagacccgcggccaggagaactggaagcagggcggggtag
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integrated database retrieval system