Hyalella azteca: 108666777
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Entry
108666777 CDS
T07535
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 6
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
hazt
Hyalella azteca
Pathway
hazt03015
mRNA surveillance pathway
hazt03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
hazt00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108666777
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
108666777
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hazt03019
]
108666777
Messenger RNA biogenesis [BR:
hazt03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
108666777
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RSLD_CPSF6
RRM_1
Motif
Other DBs
NCBI-GeneID:
108666777
NCBI-ProteinID:
XP_047738018
UniProt:
A0A979FMW6
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All DBs
Position
Unknown
AA seq
707 aa
AA seq
DB search
MADVDIDLYGDVEQVFSQEDFAEGDLYDAVLTSGNSDRPAEKRGASGSPSSTPKASESRN
GSLGPSGPKRGSGSQSSKGRPSSSEERPTYQSSRGDAGRRFQLYVGNLSWWTTDEDVASA
IKSLGVNDLVEIKFFENRSNGQSKGFCGVTVGSETSSRILMDKLGRKELNGMLPMVAYPT
KQALAQFESQCKTRASPQQGQQPPPPGPPPRMGPNGPPGQGPNGPPGPNGHGGPRMPPHM
GRPMPHPGMDGRPNGPPGPPHGHPHGPHGPQGPPHGPPHGPPHNQQHGPPHGPPHGPPQG
HPHGPPQGHPHGPPQGHPHGPPQGHPHGPQGHQHGPPQGHPHGMPHGSPGPHGPPGNHHP
GMGGPPRNMPPQPMPDSFPPGQLRDGLPPPGHRNPLPQQQGGPPRGPPPNMGPPPHSHPA
VRHPPPPSAMDQRGPPPRPGYGIQAVVTGPTGVLVSQHLAELPALHLFTAGAAGTFCVTL
DVYKRQVADASSGEYASAIETLVTAISLIRQSKVAQDDRCKILVSSLQDTLRGIEAKSYG
GGSSSSSKRRSRSPRRRHRSRSPRERDYRSRSHSRDREYESSRHREREPRDRDYDSHRSY
SREREYDRHRDRDRDRERERDRDRERYYEERYRSERSARSERSLEERPASSRERPPPEEV
RPREDPRERDRDRERERERERERDRERERDVRTREEREASSHRSSRH
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgtggatatcgacctatacggagacgtcgagcaagtcttctcacaggaagat
tttgctgaaggtgacttgtatgacgccgttttgacgagcggcaacagtgaccgaccagca
gaaaaacgaggtgctagcggctcaccgagttcaactccaaaagcatccgagtctcgcaat
ggatcgcttggaccttcaggccctaagagaggcagtggcagtcagtcctcaaaaggacgg
ccatcctcatctgaagagcgtccaacttatcaatcaagccggggtgatgcgggcagacgc
ttccagctctatgttggcaacctgtcatggtggacaactgacgaggacgtggccagtgcc
atcaaatcactgggtgtgaatgacctcgtcgagatcaagttctttgagaaccgcagcaat
ggtcagagcaaagggttttgtggcgtcactgttggctccgagaccagcagccgcatcctc
atggataagctcggccgcaaggagctcaatggcatgttgcccatggttgcttatcccacc
aagcaagcccttgctcagtttgagtctcagtgcaagactcgcgcaagtccccagcagggg
cagcagccgcccccaccaggtcctcctccaaggatgggccctaatggcccacctggtcaa
ggccctaatggacctcctggcccaaatgggcacggcgggccccgaatgcctccgcacatg
ggacgtcccatgcctcatccaggcatggatggaaggcctaatggccctcctggcccacct
catggccatcctcatggaccacatggacctcagggtccgcctcatggtcctcctcacggt
ccacctcataaccagcaacatggcccccctcatgggccaccccatggccctcctcaaggc
cacccacatggaccaccacagggtcatccgcacgggcctcctcaaggccatccacatggg
ccgccccaaggccatccacacggtcctcagggccaccaacatggccctcctcagggccac
cctcatgggatgcctcatgggtccccaggccctcatggccctcctggcaaccatcatcct
ggcatgggtggaccaccacgcaacatgccgccccagcccatgcctgactcattcccccca
ggccaacttcgagatggtcttcctcctccaggacaccgaaacccattacctcagcaacaa
ggcggccctccacggggcccacctcccaacatgggacctcccccacactcccatcccgcc
gtgcgtcacccaccgccaccctcggcgatggaccagcgaggtccgcctcctcgcccagga
tatggtatccaagcagtggtgacaggccccactggcgtgctagtctcgcagcacttagct
gagctccccgccctgcatctctttactgctggggctgcaggtaccttttgtgtgacacta
gatgtgtataagagacaggttgctgacgcctcttcaggcgagtacgcgagcgccatcgag
acgttggtgacggccatctcactcatacgccagtccaaagtggcgcaggatgacaggtgc
aagatccttgtcagctcgctccaggacactcttcgtggcatcgaggctaagagttatggt
ggtggcagcagcagcagcagcaaacgtcgctcgcgctcgccccggcggcgacaccgttca
cggtctcctcgtgaacgcgactaccgttcgcggagccactcgcgcgaccgagagtacgag
agcagccgccacagagagcgcgagccccgagatcgcgactacgacagtcatcgctcgtac
agcagggagcgcgagtacgacaggcaccgggacagggacagagaccgcgaacgagagcgc
gacagggacagagagaggtattacgaagagcgctaccgtagcgagcgcagtgctcgctcc
gagcggtctttggaagaacgccccgcctcgagccgtgagcgtccccctccagaagaagtg
cggcccagagaagacccacgcgagagggaccgagatcgtgagcgggaacgagagagggag
cgcgagcgggacagagaaagggagagagacgtacgcactcgagaggaaagagaagcctct
tcacatcgctcttcacggcactga
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