KEGG   Hyalella azteca: 108667163
Entry
108667163         CDS       T07535                                 
Name
(RefSeq) histone deacetylase HDAC1
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
hazt  Hyalella azteca
Pathway
hazt03082  ATP-dependent chromatin remodeling
hazt03083  Polycomb repressive complex
hazt04330  Notch signaling pathway
hazt04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:hazt00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    108667163
   03083 Polycomb repressive complex
    108667163
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    108667163
   04350 TGF-beta signaling pathway
    108667163
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:hazt03036]
    108667163
Enzymes [BR:hazt01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     108667163
Chromosome and associated proteins [BR:hazt03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     108667163
   HDAC complexes
    Sin3A-HDAC complex
     108667163
    BRAF-HDAC complex
     108667163
    REST complex
     108667163
    SHIP complex
     108667163
    MiDAC complex
     108667163
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     108667163
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    108667163
  Chromatin remodeling factors
   NuRD complex
    108667163
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 108667163
NCBI-ProteinID: XP_018009641
UniProt: A0A8B7N718
LinkDB
Position
Unknown
AA seq 486 aa
MTSTPHSRKKVCYYYDSDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKAT
QDEMTKFHSDDYIRFIRSIRPDNMNEYNKQMQKFNVGEDCPVFDGLYEFCQLSAGGSIAG
AVKLNKQACDLAINWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHG
DGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNFPLRDGIEDESYQSI
FEPIMTKVMETYQPSAIVLQCGADSLSGDRLGCFNLTLKGHAKCVEFVKKYNLPLLLLGG
GGYTIRNVARCWTYETAVALNADIANELPYNDYFEYFGPDFKLHISPSNMANQNTPEYMD
KIKTRLFENLRMLPHAPGVQSIAIPEDGVAEESDDEDKANPDERISIRASDKRVAPDNEY
SDSEDEGGDGRRDDRSYKLNKKKKNGGAAGAEEGAASNGAEKSAIGAASAVAEKEGGAAG
DSKQET
NT seq 1461 nt   +upstreamnt  +downstreamnt
atgacttcaaccccgcacagccgcaaaaaagtgtgctattactatgacagtgatattggc
aactattactatggacaaggacatcctatgaagcctcaccgtattcgcatgacacacaac
ctcctcctcaactatggtctgtacaggaagatggaaatttatcgtccacacaaagccact
caagacgagatgaccaagttccactcggatgactatatccgcttcatccgctcaatccga
ccagataatatgaatgaatacaacaaacaaatgcaaaagtttaacgttggagaagactgt
cctgtatttgatggcctgtacgagttctgtcagctgtctgctggtggcagcatagcagga
gctgtcaaactgaacaaacaagcttgtgatctcgccatcaactgggcaggcgggcttcat
cacgctaaaaagagtgaggcatctggcttttgctatgttaatgacatagtacttgccatt
ttagagcttctcaaatatcaccagagggttctttacattgacatcgacattcatcacggg
gatggtgttgaagaggccttctacaccactgatagggtcatgactgtttccttccacaaa
tatggtgaatatttccctggcacgggagacttgcgtgacataggtgcaggtaaaggcaag
tattatgctgtcaacttcccactgagggacggtattgaagatgaaagctaccaaagcatt
ttcgagcccatcatgacgaaggtaatggagacctatcaaccttcggctatcgtgctacag
tgtggagctgactcactttccggtgatagactgggttgctttaacctcactcttaaagga
cacgcaaaatgtgttgagtttgttaagaaatataacctgcctttattgcttctcggagga
ggtggctacaccatcagaaatgtagctcgatgttggacatatgagactgcggtagctctc
aatgcggacattgccaacgaactaccatacaatgactactttgaatatttcggccctgac
ttcaaacttcacatcagtccgagcaacatggctaaccagaacacaccggaatacatggac
aaaataaagacacgtctttttgagaacctgcgtatgctacctcatgcccccggcgtccag
agcatcgccatacccgaggacggcgtggccgaggagagcgacgatgaagacaaagcaaac
cccgacgagcgcatcagcatccgcgcctccgacaagcgcgtcgcgcccgacaacgaatac
tcggactcggaggacgaaggtggcgatggtcgccgggatgatcgctcttacaagctgaac
aagaagaaaaagaatgggggagctgctggtgctgaagaaggggcggccagtaacggagct
gagaagtcagccattggagcggcatctgctgttgcggagaaagaaggcggggcggccggg
gattccaaacaagaaacatga

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