Hyalella azteca: 108667891
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Entry
108667891 CDS
T07535
Name
(RefSeq) ATP-dependent RNA helicase DDX42-like
KO
K12835
ATP-dependent RNA helicase DDX42 [EC:
5.6.2.7
]
Organism
hazt
Hyalella azteca
Pathway
hazt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hazt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108667891
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hazt03041
]
108667891
Enzymes [BR:
hazt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
108667891
Spliceosome [BR:
hazt03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
108667891
Complex B
108667891
Complex C
U2 SnRNP specific factors
108667891
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
Cas3-like_C_2
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
108667891
NCBI-ProteinID:
XP_018010479
UniProt:
A0A8B7NA70
LinkDB
All DBs
Position
Unknown
AA seq
767 aa
AA seq
DB search
MSFNRGRGFGFGSFKVKRPEIAPPPPSASLSKHGYHTLTSITNNAMHGGAYGYGQVRKRP
KTEDEYFAEEDEGAKNDLDAELPYQPAPGSPGPAACKGNSDSEEDPLDAFMVGIEQQVKR
EDRRTAANADLAAKDSGSSSALESKGVRQDIDEEDDEESYYRYIEENPNAGKHGDDSEEE
VEYDAEGNPIVTRKSKVIDPLPPIDHSTVNYPDFTKNFYQEHEEIAALDNAQVTDLRRKL
GITVTGFAASKPVSSFGHFGFDEALLKSVRKSEYSQPTPIQAQAVPVALSGRDIIGIAKT
GSGKTAAFLWPLLIHIMDQPELAPGDGPIGLILAPTRELAQQIHVEAKKFGKVYNINVVC
AYGGGSKWEQSKALEAGAELVVATPGRIIDLVKMKATNLTRVTFLVLDEADRMFDMGFEP
QVRSICDHVRPDRQTLLFSATFKRKVERLARDALTDPIRIVQGELGEANQDIEQSVHVFS
RADQKWSWLTRHLVSLMAAGSVLIFVTRKDNAEELAKNLKVKEFECLLLHGDMSQYERND
VITAFKKATTPVLVATDVAARGLDIPHIRTVVNYDVARDIDTHTHRIGRTGRAGEKGRAF
TLITEKDKEFAGHLVRNLEAANQEVTKELLDLAMTSQWFRKSRFRGGKAKQLGGRGLGFR
ERPGLGSQDHSGSSSSSYSSPAVKAMGPAGQAYSGVPDSSGPATNRLSALRAAFEAQYKS
QFTPSSADPAWQSTAEGSHYAKMAEREKAKETEAEANKKRRKSRWED
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atgagtttcaatcgaggccgtggctttgggtttggaagtttcaaagtcaagcgtcctgaa
attgcacctccacctccaagtgctagcctcagcaagcatggttatcacactcttacttct
atcacaaacaatgctatgcatggaggtgcatatggttatgggcaagtccggaagaggcca
aagactgaagatgaatattttgcagaagaagatgaaggagctaaaaatgatttggatgca
gagttgccctaccagcctgccccaggctccccaggacctgctgcttgcaaaggcaattca
gactctgaagaagaccctcttgatgccttcatggttggcattgaacagcaagtcaaacgt
gaagatagacgcacagctgccaatgctgaccttgctgccaaggatagtggcagcagctca
gctcttgaatccaagggggtgcggcaggacatagatgaagaggatgatgaagaatcttat
tacagatatattgaggagaaccctaatgctggcaaacatggagatgatagtgaggaggaa
gtggagtatgatgccgaggggaatcctattgtcacacggaaatctaaagtgattgatcct
ctccctcccattgaccactcaacagtgaattatcctgacttcactaaaaacttctaccaa
gagcatgaagaaattgctgcccttgataatgcacaggttactgatctcagacggaagctt
ggcatcactgttacaggttttgctgcttcaaaacctgtttccagttttggtcactttggg
tttgacgaggcgctgctgaagtctgtacgcaagtctgagtacagtcaacctactcctatc
caagctcaggctgttcctgtagctctcagtggtcgtgacataatcggtatcgccaagacg
ggcagtggtaagacagcagcatttctatggccactcttgattcacatcatggaccagcct
gagctggccccaggcgacggccccatcggcctcatcctcgcacccaccagggaactggcg
cagcaaatacacgtcgaagctaaaaagttcggcaaggtgtacaacatcaacgtggtgtgc
gcgtacggcggcggcagcaagtgggagcagagtaaggcgctggaggcgggcgctgagctc
gtggttgccacccctggacgcatcatcgatttggtcaaaatgaaggccaccaacttgacg
cgcgtcactttcctcgtgctcgacgaggccgacaggatgtttgacatgggctttgagccg
caagtacgaagcatctgtgaccacgttcgtcctgaccgccagacgttgctattctctgcg
acgttcaaacgcaaagtggagcgtcttgcacgcgatgctctcaccgaccccatcaggatc
gttcagggcgagcttggcgaggccaaccaggacattgaacagagcgtacacgtgttcagt
cgcgctgaccagaagtggtcgtggctcacacgacacctcgtgagcctaatggcggcgggt
tcggtgcttattttcgtcactcgcaaagacaacgccgaagagctcgccaaaaacctcaaa
gtcaaagagtttgagtgcctgttgctgcacggcgacatgtctcagtacgaacgtaacgac
gtgatcacggcgttcaagaaggcgacgacgccggtgctcgttgcgacggatgttgcggcg
cgcggtctcgacattccccacatccgtaccgtcgtcaactatgatgtggcacgcgacatt
gacacgcacacgcacaggatcggacgaacaggtcgcgctggggagaagggccgcgcgttt
acgctcatcaccgaaaaagacaaggagtttgccggtcacctcgtacgaaacctcgaggct
gcgaaccaagaagttaccaaagaacttcttgatctggctatgacttctcaatggttcagg
aaaagcagattcagaggcggtaaagcgaagcagctaggcggacgaggtctgggattcagg
gagcgccccgggctcgggtcacaagaccacagcgggtcctcctcttcctcttactcttcc
cctgcggtcaaagccatggggcccgcgggccaggcttatagcggcgtcccggactcgtca
ggtcctgctactaaccgcctgtctgctcttcgtgctgcattcgaagctcagtacaagtca
cagttcactccaagcagcgctgacccagcgtggcagagcactgctgaggggtcgcattat
gccaagatggccgaacgcgagaaagccaaagaaacagaagccgaggcgaacaaaaaaagg
agaaaatcacgctgggaagattga
DBGET
integrated database retrieval system
