Hyalella azteca: 108668971
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Entry
108668971 CDS
T07535
Name
(RefSeq) ATP-dependent RNA helicase Ddx1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
hazt
Hyalella azteca
Brite
KEGG Orthology (KO) [BR:
hazt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hazt03041
]
108668971
03016 Transfer RNA biogenesis [BR:
hazt03016
]
108668971
Enzymes [BR:
hazt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
108668971
Spliceosome [BR:
hazt03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
108668971
Transfer RNA biogenesis [BR:
hazt03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
108668971
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
Motif
Other DBs
NCBI-GeneID:
108668971
NCBI-ProteinID:
XP_018011739
UniProt:
A0A8B7NDQ7
LinkDB
All DBs
Position
Unknown
AA seq
735 aa
AA seq
DB search
MAAFEEMGVLPEIAKAVEDMDWTLPTDVQNEAIPMILGGGDVLMAAETGSGKTGAFCLPI
LQTVWETLKDIQLGKTSKINKETPTKWQLSFSDRDTGLAVTPDGLRCQSREQKMWQGGRA
NKGVTAPGKFYYEATVSDEGLCRVGFSTANAALDLGTCKNGFGFGGTGKKSNNRQFDDYG
ESFGLHDVIGCYLDLDNMSISFSKGGQPLGQAFTLKSEFKNVALFPAVVLKNAEMAFNFG
ETPFKFPPTGGYKAICEASSELTATGVTKASSFKPKNNAPQAIIIEPSRELAEQTYKQLE
LFSGYVDNPKVRSLLVVGGVPVREQMNALSAGVDIVCGTPGRLEELINTGQLALQNCRFF
VLDEADGLLKAGHEKLINSIHGSIPKLTPDGKRLQMVVCSATLHSFEVKRMAERLMHFPT
WIDLKGEDAVPETVHHVVLHIDPRVDVSWGSLRTHVQTDGVHANDNVRKGNNTPETLSEA
VKMLKGEYCIKAIDTHNIDKAIIFCRTKVDCDNLERYFNQLGGGARNPTNPYSCVCLHGD
RRPQERKDNLESFKRDEVKFLICTDVAARGLDITGLPFAINVTLPDEKSNYVHRIGRVGR
AERMGLAISLVSDVPEKVWYHGEWCKSRGKNCYNTRLTTEHGCCIWYNEPQYLADIEEHL
GVTIQCVGSDLKVPVNEFDGKVVYGERRSNAGSNYQTHVEQLAPTVQELADLEREAQRVY
IRRQYGKCYPWQRGG
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atggctgcctttgaagagatgggggtcctccctgaaattgcaaaagctgttgaagacatg
gattggacgctacctacagatgtccagaatgaagcaattcccatgatcctgggtggaggt
gatgttctgatggctgctgaaacaggcagtggtaaaactggagccttctgcttacccatt
ctacagactgtgtgggagactcttaaggacatccagctcggcaagacttctaagatcaac
aaagagactccaactaaatggcaattgagcttctcggatcgggatactggacttgcggtg
acacccgatgggctgagatgccagtcccgagagcagaaaatgtggcagggcggacgggct
aacaaaggcgtgacagcacctggaaagttctactatgaagcaacggtctctgacgagggt
ctatgcagagtgggattttctactgctaatgctgctcttgacttaggaacatgtaagaat
ggctttggtttcggaggaactggtaaaaagtccaacaaccgccagtttgacgactatggt
gaaagcttcggtctgcacgatgtgattggctgctaccttgacctggacaacatgtccatt
agcttcagtaaaggtggccaaccccttggacaagccttcaccctcaagagcgagtttaaa
aatgttgcattgttcccggccgttgttctcaagaatgcagagatggctttcaactttgga
gagacgcctttcaagttccctccaacgggaggctataaggccatctgcgaggccagcagc
gagttgactgctacaggcgtcaccaaggcatcttcgttcaagcccaaaaataacgctcct
caagcaattattattgagccatcgcgcgagctcgcagaacagacgtacaagcagctggag
ctgttcagtgggtacgtagacaaccctaaagtgcggtcactactcgtggtcgggggcgtt
cctgtgagggagcagatgaacgcgctcagtgctggcgtggacatcgtgtgtggcacacca
ggtcgtcttgaggagctcatcaacacaggccagcttgcgctccagaactgccgcttcttc
gtcctcgatgaggccgatgggctgctaaaagctggtcacgagaaactcatcaacagcatc
cacggaagcatcccaaagttgacgccggatgggaagcgcctgcaaatggtggtgtgcagc
gccacgctgcattcctttgaagtcaagaggatggcggagcgcctgatgcacttccctacc
tggatcgatctgaagggcgaagacgcggtgcctgaaacagtgcaccacgtagtgttacat
attgacccgcgcgtcgacgtctcgtggggcagcttgcgcactcacgtccagactgacggc
gtgcatgccaatgacaacgtcaggaaaggcaataacacgcccgagacgctgagtgaggcc
gtgaagatgctgaagggcgaatattgcatcaaggctatcgacacgcacaatatagataaa
gctataattttctgcagaaccaaagtggactgtgacaaccttgaacgttacttcaatcaa
cttggtggcggcgcgcgcaacccaaccaacccgtactcatgcgtgtgcctccacggcgac
cgacgcccgcaggaacgcaaagataacctcgagagtttcaagcgcgacgaagtcaagttt
ctgatctgtacggacgttgcagctcgtggcctcgacattaccggtctgccttttgcaatc
aacgtgacgttaccggacgagaagagcaattatgtgcacaggatcgggcgtgttggtcgc
gctgaaagaatgggtctggcaatctcgctggtatcggacgtaccagagaaggtctggtat
cacggcgagtggtgcaagagtagaggaaagaactgttacaacaccaggctcactacagaa
cacggctgctgtatctggtacaatgaacctcagtacctggctgatatcgaggagcatcta
ggcgtcactatccagtgcgtgggcagcgaccttaaagtcccagtgaatgaatttgacggc
aaggtcgtgtatggagagcgccgctccaatgctggatcaaactatcagactcacgtggag
caactcgccccgaccgtgcaggagcttgcagatctcgagcgcgaggcacagcgcgtgtac
atccggcgtcagtacggaaaatgctatccgtggcagcgaggcggatag
DBGET
integrated database retrieval system
