Hyalella azteca: 108669509
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Entry
108669509 CDS
T07535
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
hazt
Hyalella azteca
Pathway
hazt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hazt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
108669509
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hazt03400
]
108669509
DNA repair and recombination proteins [BR:
hazt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
108669509
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
MutS_I
AAA_27
Motif
Other DBs
NCBI-GeneID:
108669509
NCBI-ProteinID:
XP_018012345
UniProt:
A0A8B7NFF1
LinkDB
All DBs
Position
Unknown
AA seq
922 aa
AA seq
DB search
MSNSISKDDFNEGPQEYHTGVIAFFKSLPEAGRACAQIFDRGDYYSVHGETARLAAATVF
HTNAVIKKRGSGQNQVDTVFLNQSNFETFIRELLLVKQYRVSIYKQQNNKNDWAEEFKAS
PGNLSQLEDVLFGGSQEQTNNAAVMGVKIASDGSNKTVGVGYIDITSRVLRVCQFTDTEN
FSNLEALIVQLGPKECLLPHGEAKTRHGACLERNGVLVTERKKTDFSASDAAQDLSRLVR
GWSSGSVVARPEMQHSLATGALGAALKYLELTSNEGNFGQFSCSVYDLNQFMRLDSAALK
ALHVETNDNTGPAVHNTTLLSVLDKCRTSAGHRMMAQWLRQPLLDINQIEERQDLVTAFV
ESAEMRNSVAEVHLKRVPDLPRIARRLAKKQANLQDCHRLYQCAEVLPDLCESLARYEGP
HCATISAVFISPIQESVGDLSKFQEMIETTVDLDQVKQGVYVIKPDFDEELCAIRGSLDT
LESQLNSALRVAAADLGLEAGKTIKLEQNGQYGHFFRVTLKDEKSIRNNRAYHTLDTNKA
GVRFRNSRVADISAEYSTLMKQYEKQQHKVVTEILAIASGYVEVIQSLSFALTTLDCISA
LASAAVSSLVPYVRPHMRPRGSGSLHLVQCRHPCLELQDGVSYIPNDTSMGEDNGCFHII
TGPNMGGKSTYLRSVATAVLMAHVGSYVPCNEASIPIVDAILARVGAGDCQQKGVSTFMA
EMLETSSILKTATRDSLIIVDELGRGTSTYDGFGLAWAISEHIAREIKSYCLFATHFHEV
TALAEVLPETVRNFHVAAATSEDTLTLLYQVLPGACDRSFGIHCATIAHFPPKVVEYAKR
KADELEDNFAAGDDEDNPDAVVKRRKEKSEGEELIKATLTEASGWKLDNMSDDELEQALC
ILKSNIVAKDNSYINHLLAVSY
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atgtctaacagcatttctaaggatgatttcaacgaaggaccccaagagtaccacactggg
gtaattgccttcttcaagtctttaccagaggctggcagagcatgtgcccaaatttttgac
cgaggagactactactctgtacatggagagactgccaggcttgctgcagctactgttttc
catacaaatgctgtcatcaagaaaagaggctctggccaaaatcaagttgacaccgtgttc
ctcaaccagtccaactttgaaaccttcatccgagaactgctcctggtgaagcagtacaga
gtgagcatctacaaacaacagaataataaaaatgactgggctgaggaattcaaagcatct
ccaggcaatcttagccagctggaagacgttttgtttgggggctctcaggaacagaccaat
aatgcagccgtcatgggggtgaaaattgcctctgatggctctaacaagactgtaggtgtt
ggttatatagacatcacatcccgggtgctgcgagtttgccagtttacagacacagaaaat
ttcagcaacttggaggcgctcatcgtacagctcgggcccaaggagtgcctgctgcctcat
ggcgaggccaagactcggcatggcgcgtgccttgagcgcaatggggtgctggtgacggag
cggaaaaagacagactttagcgcgagcgacgcggcgcaggatttgagccgcctcgtgcgg
ggctggagcagcggatctgtcgtggccaggcctgagatgcagcactcactggccaccggc
gcgctcggtgctgctctcaagtaccttgagctgacttcaaacgaagggaacttcgggcag
ttcagctgcagcgtgtatgacctgaaccagttcatgcggctggactccgctgcactaaag
gccttgcacgttgagaccaacgacaacacaggccccgcagttcacaacactacgctgctc
tctgtactggacaaatgtcgcaccagcgccggccacagaatgatggcacagtggctcagg
cagccgctgcttgatatcaaccagattgaggagcggcaggacctggtgacggcgttcgtg
gagagcgcggagatgcgcaacagcgtcgcggaggtgcacctgaagcgcgtgcctgacctg
cccaggatcgccaggcggctcgccaagaaacaagcaaacctgcaggactgtcaccgacta
taccagtgcgccgaggtgctgccagatctctgcgagtctctggctcgttatgaaggacct
cactgcgctaccatctctgcagtcttcatctcaccaatccaggagagtgttggcgacctc
agcaaattccaggagatgattgagacgactgttgatctagatcaggtcaagcaaggcgtt
tatgtcatcaaaccggactttgatgaagaactttgcgccatccggggaagcctggacacg
ttggaaagtcaactaaacagcgccctgcgtgtagctgctgccgacttgggactcgaggct
ggcaaaacgataaagcttgaacaaaacggccagtacggccacttcttcagagtcactttg
aaggatgagaagtccatccgcaataatcgcgcctaccacacgctggacactaacaaagcc
ggcgttcgtttccggaatagcagagtcgctgacatcagcgctgaatattccaccctgatg
aagcagtatgagaagcagcaacataaagttgttacggaaattcttgcgattgccagtggg
tatgtggaggtgatccagagcctgtcgtttgccctcactaccttggactgcatcagtgct
ctggcctccgccgctgtctcgtccctggtgccgtacgtgcgaccccacatgcgtcctcgg
gggtcgggctcccttcatctcgtccagtgcaggcatccctgccttgaactgcaggatggc
gtgtcgtatattcctaatgacaccagcatgggtgaagataatggttgcttccatatcatc
acggggccgaacatgggtggcaagtccacctaccttcgtagcgtggctacggctgtgctc
atggctcacgttggatcgtacgtgccatgcaatgaggccagcattccaatcgtggacgcc
atattagctcgagttggtgccggtgactgtcagcaaaagggcgtttctactttcatggca
gagatgctggagacttcaagtatactcaagactgcaacacgcgactctttgatcatcgtc
gatgagctgggtcgtggtacttcaacttacgacgggtttggcctcgcctgggccatatct
gaacacattgctcgggaaatcaagtcctattgtttgttcgctacacatttccatgaagtg
actgccttagcagaagttctgcctgaaactgtcaggaacttccacgtggcggctgctact
tcagaagacacattgaccttattgtaccaggtgctacctggtgcgtgcgacagaagcttt
ggaatccattgcgctacaatagcccacttcccacctaaggttgttgagtatgctaaacgg
aaagctgatgaactagaagataactttgctgctggtgacgacgaagataatcctgatgct
gtggtcaaaaggaggaaagaaaaatctgaaggagaagagctcattaaggcaactttaacg
gaagcatctggctggaaacttgacaacatgagtgacgacgaacttgagcaagctctgtgt
attctgaaatcaaacattgtggccaaggacaactcttacattaatcatttgcttgcagta
tcatattaa
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