Hyalella azteca: 108670483 Help Entry 108670483         CDS       T07535                                  Name (RefSeq) 3'-5' RNA helicase YTHDC2   KO K20099   ATP-dependent RNA helicase YTHDC2 [EC:5.6.2.6] Organism hazt  Hyalella azteca Brite KEGG Orthology (KO) [BR:hazt00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03041 Spliceosome [BR:hazt03041]     108670483 Enzymes [BR:hazt01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.6  RNA 3'-5' helicase      108670483 Spliceosome [BR:hazt03041]  Other splicing related proteins   Spliceosome associated proteins (SAPs)    RNA helicase-like proteins     108670483 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Helicase_C HA2_C DEAD OB_NTP_bind FtsK_SpoIIIE AAA_19 nSTAND3 Cas3-like_C_2 AAA_25 HA2_N AAA_11 AAA_22 AAA_16 AAA_29 ATPase nSTAND1 Ank_2 T2SSE SRP54 AAA_7 Motif Other DBs NCBI-GeneID:  108670483 NCBI-ProteinID:  XP_047740257 UniProt:  A0A979FUL6 LinkDB All DBs Position Unknown AA seq 1283 aa AA seqDB search MRRLIDIGHLPSFLKIVLDLKELGLLRSLGRLTPGPPQVPPSPCSPAGGGGRRLPVWGRH RQILDAISRHQVVLVCGDTGSGKSTQVPQMLLQAATQAGRPVRMLCTQPRRVAAVAVAER VAHERGERLGHTVGYQIRLESKLSSSTLLTFCTAGVLLRTLMGGDAALATITHVLVDEVH ERDRYMDVLLTVLKDSLPKYHHLKLVLLSAAMDVALYSKYFGTCPIIDVPGQCFPVTEYY LEDVLKHTAYSTKAMTEALKRLDKRQEARASEDAWCLRLGASTTAVAEAVASAVAKAEAG AGAEAGPSAVAKAEAVAEAGAGAVAVAKAEAGASAVAKAEAGPSAEAAATTVADGGAEAV ADEVSAGRRQEADDVIIEDEAGSDAAAEMDGLLEAAFLEDSDVAFARILCLVLTGDVSPD HQVCPLTTRVAVVETLLATGATVGLRSADGRTAAAWAAATNHQAAADLLRSYGAVDDMGG SGCAAATGGMAVGGGMAVGEAASTAEDDRRLQAYLASTPADHTDVHLVCHVVHHVHTTQP PGALLVFLPGLDSIVAVRDGIEARERDYLACGTRVTLHVLHSSMPMADQKRVFTPAARGY RKIVLATNIAETSLTIDDVVYVIDSARVKETSYDAVGGATRLQEVWASRASLLQRRGRAG RCRPGVNYCLLPRARLGDLAPYQLPEILRVPLQVGAVGPLQVLWVPCRCCGSPCRCCGSP AGAVGPLQVLWVPLQVLWVPLQVLWVPCRCCGSPADAPRVMPHCVHEIPRVMPPNAPQCM EALDGWGEVTPLGHQLLELPLPPALGKLVLLGALLGCLDPCLTLAACLAHRDPFVTPTSP EGKVRFNRVKVEVFAGGPTGARGGPTGGRGGPGGKHAPAAGGWGYSDHLVLVRAFQLWQV ARAGGYERSWCSRHFVSSVAMDMISGIRQQVLAQLHAMGFVKSRDLREENLHSDNMAAVK GALVGAAYPHLLRVDRELLTLRSARHSQVRLHPSSCLHDLLVGGDLPTAARLSKKEVVRA LPSDWLVYDEVLVTGPLTYARTLTSVSALSVLLLAGPTRLPLQALSGLQADGADSDSDTG PQGLAGYSRLGLDEWVQFVGPPSHLQLALQLRYKLHALLLRRLKSPVKGVCPGDADVIRA VVAALTRHDVTANPRTTSSPAAGTPTRTGAPSAGAGGAAAPTNPAGAGGAAPINPKKKGR HVDRRAIRTEGRGGRLVDGVDQIASTLVAASLMDTRPGGVGEQRSSVPQSIDSHHRHPPP PHPSRPGDPPRICQPPAGRHGSR NT seq 3852 nt NT seq  +upstreamnt  +downstreamnt atgagacgcctgattgacatcgggcacctcccttctttcttgaagatcgtcctcgatctg aaggagctggggcttctgcgctcactggggcgcctcacccccggccccccgcaggtaccc ccctcaccctgttcccccgcgggtggtggggggcggcggctgcccgtgtgggggcgccac cgccagatcctggacgccatctcccgccaccaggtggtgcttgtgtgcggcgacaccggc tccggcaagtccacccaggtgccgcagatgctgctgcaggcggccacgcaggcgggtcgc cccgtgcgcatgctgtgtacgcagccgcgccgcgtcgccgccgtcgccgtcgctgagcgc gtcgcccacgagcgcggcgagcgcctcggccacaccgtcggttaccagatccgccttgag agcaagttaagcagctcgacgctgctgacgttctgcacggcaggggtgctgctgcgcacc ctcatgggaggcgacgctgccctcgccaccatcacccacgtgctggtggacgaggtgcat gagcgcgaccgctacatggacgtcctcctgaccgtgctgaaggatagcctgcctaaatac caccacctcaagctggtactgctgtccgccgccatggacgtggctctctactctaagtac ttcggtacttgccccatcattgatgtgcccgggcagtgctttcctgtgacggaatactac ttggaggacgtgctaaaacacactgcgtacagcaccaaggccatgactgaggccctcaag aggctcgacaagaggcaggaggcgcgtgcctctgaagacgcttggtgcttgcgtctcggt gcctccaccactgctgtggctgaggctgtggctagtgctgtggctaaagctgaggcaggg gctggtgctgaggcaggacctagtgctgtggctaaagctgaggctgtggctgaggcagga gctggggctgttgctgtggctaaagccgaggcaggagctagtgctgtggccaaagctgag gcaggacctagtgctgaggctgcagcaacaactgtggctgacggtggcgctgaggctgtg gctgacgaagtgtcagctggtcgacgccaggaggcagatgacgtcatcatcgaggacgag gcagggagcgacgctgccgctgagatggacggcctcctggaggcggccttcctggaggac agcgacgtcgccttcgcccgcatcctgtgcctcgtcctgacgggggacgtgtcccctgac caccaggtgtgtccgctgaccaccagggtggcggtggtcgagacgcttctagcgacgggg gcgacggtgggcctccggtccgctgacggacggacggcggcggcctgggcggcggccacc aaccaccaggcggccgccgacctcctgcggtcctacggggcggtggacgacatgggcggc agcggttgtgcggcggccaccggagggatggcggtgggcggcgggatggcggtgggcgag gcggcgtctacggcggaagacgaccgccgcctgcaggcgtacctggcctccacccccgcc gaccacaccgacgtccacctcgtctgtcatgtcgtccaccacgtccacaccacccagccg ccaggggcgctgctggtgttcctccccggcctggacagcatcgtggcggtgcgtgacggc atagaggcgcgtgagcgtgactacctagcgtgcggcacacgcgtcacgctacacgtgctg cactccagcatgcctatggcagaccagaagcgggtcttcacaccagcagcccgcgggtat cgcaagatcgtcctggccacgaacatcgcagagaccagcctcactatcgacgacgtggtc tacgtcatcgactccgccagggttaaggagacgagctatgacgccgtggggggcgccacg cgcctgcaggaggtgtgggcgtcacgggcgtcgctcctgcagcggcgggggcgcgcgggg cgctgccgcccgggggtcaactactgcctcctgccgcgggcccgtctgggggacctggcc ccctaccagctgcccgagatcttgcgggtccccctgcaggtgggtgctgtgggtcccctg caggtgctgtgggtcccctgcaggtgctgtgggtccccctgcaggtgctgtgggtcccct gcaggtgctgtgggtcccctgcaggtgctgtgggtccccctgcaggtgctgtgggtcccc ctgcaggtgctgtgggtcccctgcaggtgctgtgggtcccctgcagatgccccgcgtgtc atgccccattgtgtccatgagattccccgcgtgatgccccccaatgccccacagtgcatg gaggccctggatgggtggggggaggtgacccctctgggacaccagctgctggagctgcct ttgccccccgcgttggggaagctggtgctgctgggggcgctgctggggtgcctggacccc tgcctgaccctggccgcctgcttggcccaccgggaccccttcgtcacccccacctccccc gaggggaaagtgcgcttcaacagagtcaaagtagaggtcttcgctgggggaccgactggc gcccgtgggggaccgactggcggccgtgggggacccggtgggaagcatgcacctgctgca ggtggctgggggtacagcgaccacctggtgctggtgcgggcgttccagctgtggcaggtg gcgcgtgcaggtggctacgagagaagctggtgcagccgccacttcgtcagcagcgtcgcc atggacatgattagtggcatccgtcaacaggtgctggcgcagctgcatgccatgggattc gtcaagagccgcgacctgagggaggagaacctgcacagcgacaacatggcggcggtgaag ggggcgctggtgggggccgcgtacccccacctgctgagggtggacagggagctcctgacg ctgaggtcagcacggcacagccaagtgaggcttcacccgagctcctgcctccacgacctc ctggtggggggcgacctccccaccgccgcgcgcctgtccaagaaggaagtcgttagggcg ctgccctccgactggctggtgtacgacgaggtgctggtgacgggcccgctgacgtacgcc cggacgctgacgtcagtgtcggcgctgtcggtgctgctgctggcgggccccactaggctg cctctgcaggcgctcagtgggctccaggctgacggcgctgatagcgacagcgacactggg ccccagggcctcgcgggctacagcagactgggcctcgatgaatgggtccagttcgtgggc cctcccagccacctccagctggcgctgcagctgcgttacaagctacacgctcttctgctg cgacgtctcaagtcccccgttaagggcgtgtgtcctggcgacgcggacgtcatcagggcc gtcgtggcggcgctgacacgtcacgacgtcacggccaatcctcggacgacctcctcccca gctgcaggcacccccactagaaccggcgcaccctcagcgggggctgggggagcagcggca cccactaacccagcgggggctgggggagcggcacccattaaccccaagaaaaaaggacga cacgtcgacagacgggccatcaggacagagggccgcggtggacggctggtggacggagtg gaccaaatagccagcaccctcgtggcggccagtctgatggacacgcggcctggtggggtg ggtgaacaacgatcatctgtcccccagtccatcgacagccatcaccgacacccacctccc ccacacccgtcccgacctggagatcccccacgtatttgtcagccacctgctgggcggcat gggtcgcgttga

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