KEGG   Hyalella azteca: 108670496
Entry
108670496         CDS       T07535                                 
Name
(RefSeq) chromatin assembly factor 1 p55 subunit
  KO
K10752  histone-binding protein RBBP4
Organism
hazt  Hyalella azteca
Pathway
hazt03082  ATP-dependent chromatin remodeling
hazt03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:hazt00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    108670496
   03083 Polycomb repressive complex
    108670496
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:hazt03036]
    108670496
Chromosome and associated proteins [BR:hazt03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     108670496
  Histone modification proteins
   HAT complexes
    HATB complex
     108670496
   HDAC complexes
    Sin3A-HDAC complex
     108670496
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     108670496
    PRC2.2
     108670496
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     108670496
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    108670496
  Chromatin remodeling factors
   NuRD complex
    108670496
   NuRF complex
    108670496
   NuRF complex (fruit fly)
    108670496
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40 CAF1C_H4-bd WD40_Prp19 Beta-prop_RIG_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 Beta-prop_TEP1_2nd Beta-prop_EML_2 EIF3I WDR55 WD40_WDHD1_1st Beta-prop_WDR75_1st WD40_MABP1-WDR62_2nd Beta-prop_EML WD_LRWD1 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR19_1st WD40_RFWD3 ANAPC4_WD40 Beta-prop_DCAF12 Beta-prop_RIG_1st WD40_MABP1-WDR62_1st eIF2A Beta-prop_SPT8 NBCH_WD40 Beta-prop_IFT140_1st MIOS_WD40 Beta-prop_IFT122_1st Beta-prop_DCAF4
Other DBs
NCBI-GeneID: 108670496
NCBI-ProteinID: XP_018013459
UniProt: A0A8B7NIJ4
LinkDB
Position
Unknown
AA seq 432 aa
MGDKEGSAKGAETFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVT
RPEGKDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDAAHYDNEKGEFGGFGSVSGK
IEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPSGECHPDLRLR
GHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKENRVIDARTIFTGHTAVVEDVA
WHLLHDSLFGSVADDQKLMIWDTRSNNTNKPSHTVDAHTAEVNCLSFNPYSEFILATGSA
DKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEDQ
SPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVVCSVSEDNIMQVWQMAENIYNDEEP
ETPVSELESAAS
NT seq 1299 nt   +upstreamnt  +downstreamnt
atgggtgataaagaaggaagcgcaaaaggagctgaaacatttgatgatgctgttgaggaa
agagtcatcaatgaagaatacaagatatggaagaagaacacacctttcctttatgatctt
gttatgacccatgcactggagtggccatctcttactgctcagtggctgcctgatgtcaca
aggcctgaagggaaggactacagtattcaccgccttatacttgggactcacacaagtgat
gaacagaaccacctccttattgcctcagttcagctgccaaatgaagatgctcagtttgat
gctgcgcattacgacaatgaaaaaggagagtttggtggctttggatctgtgagcggtaag
atagagatcgagattaagataaaccatgaaggtgaagtaaacagagctcgctacatgcca
caaaatccctgcgtgattgccaccaagactccctcaagtgacgtgcttgtttttgattac
accaaacaccccagcaaacctgacccatcgggcgagtgtcatcctgaccttagattgcgc
ggtcaccagaaggaagggtacggtttatcttggaatcccaacctgaacggatatttgctg
agtgcctccgatgatcacaccatttgtttgtgggacatcaatgcaactcctaaagaaaac
cgagttattgatgccaggacgatctttaccggtcacacagcggtcgtagaggacgtcgcg
tggcacttgctccacgattcgctctttggttcggtggccgatgatcagaagctcatgatc
tgggacactcgcagcaacaacactaacaaaccctcgcacaccgtcgacgctcacactgct
gaggtcaactgtctctccttcaatccttattccgagttcatcctggctacgggcagtgcc
gacaagactgtggccttatgggatctacgcaaccttaaactcaaactgcattcctttgag
agtcataaagatgagattttccaggttcaatggtccccccataacgaaactattctcgcg
agctccggcactgatcgccgcctccacgtctgggatctcagcaaaatcggagaggaccaa
agtcccgaggatgccgaggacggcccccccgagttgcttttcatccacggcggacacacg
gccaagatttccgatttttcatggaacccgaacgagccgtgggtggtttgctccgtcagc
gaagataatatcatgcaggtctggcaaatggccgaaaatatttacaatgacgaggaaccg
gagacgccggtgtcggagctggaatcagcggcgtcgtga

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