KEGG   Hyalella azteca: 108670976
Entry
108670976         CDS       T07535                                 
Name
(RefSeq) pre-piRNA 3'-exonuclease trimmer
  KO
K01148  poly(A)-specific ribonuclease [EC:3.1.13.4]
Organism
hazt  Hyalella azteca
Pathway
hazt03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:hazt00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    108670976
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hazt03019]
    108670976
Enzymes [BR:hazt01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.4  poly(A)-specific ribonuclease
     108670976
Messenger RNA biogenesis [BR:hazt03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Other 3'-5' decay factors
     108670976
SSDB
Motif
Pfam: CAF1
Other DBs
NCBI-GeneID: 108670976
NCBI-ProteinID: XP_018013950
UniProt: A0A8B7NJX0
LinkDB
Position
Unknown
AA seq 684 aa
MVDVTKENFAALLPHIEADLRSALFVAIDTEFTSLLTNTRYSNEWFDSGSDRYRKLRNNL
TNVAICQLGLAICKPSARSNEYECRVYNIFLQPPHFLDHDVLMLCQASSLSFLAAHEFDF
NKVRLLSWYQQENFAALLPHIEADLRSALFVAIDTEFTSLLTNTRYSNELVLRVSAACKD
SEPHDRGVGHEGAPLPEHQDRTLAPSLLAALHNTTPDLHAQLRHQRIIVRKVTAEERTQL
ADRISHDWQELTDDTLQWLTGCSHIMWLMASLRLPVVVHNGIIDIMLIYQQFFGPLPATL
PAFKKAFHSELPCVFDTKLMAYQLKRIYKEEVPVSECLSNTTLAPLTAALQEQLPVLFKP
NLSITQPYNKYSGGERPHEAGYDAYLTAACCLHLAHLHFTYDLPQRSLCRAMDARELLCQ
LKNFANKINISRAAVFYVNLTGKDRTAPRPPWLIVENTNRFFSFRGSENNVDVNDNIAAR
EIKTHSSSSMPVYFDPQVLHAREPQTGVSNEQPHPSTRSIWTIDNNGFVIKQPDTSYLSQ
HCNTNEKRSNNLTADSNSNVQKEPKLPFVSANSKDFSGGLVCHAQNVKPLEKFSPETVSL
LLSRFGSVDVRSWRRNKLLVAVASYDTHDQILTSFRAPGLRVYPYSALKHSALVRGVLWT
GLLASGGLGAFLLYSAVTESGTRR
NT seq 2055 nt   +upstreamnt  +downstreamnt
atggttgacgtaactaaagaaaatttcgccgcgctgctgccccacatcgaggctgacctc
aggtctgcgctcttcgtggccatcgacacagagttcaccagcctgctcaccaacacgcga
tactccaacgaatggttcgactctggctcagaccgctaccggaaattaaggaacaactta
acgaacgtcgccatctgccagctgggtctcgccatctgtaagccgtcagcaagaagcaat
gaatatgagtgccgcgtgtacaacatcttcctacagcccccacacttcctggaccacgac
gtccttatgctctgccaggcctcctccttatccttcctcgccgcccacgagttcgacttc
aacaaggtgcgtctgttgtcttggtatcaacaagaaaatttcgccgcgctgctgccccac
atcgaggctgacctcaggtctgcgctcttcgtggccatcgacacagagttcaccagcctg
ctcaccaacacgcgatactccaacgagttagtgctgcgtgttagtgctgcgtgtaaagac
tccgagccgcatgaccgtggggttggacacgagggggcgccgctccccgagcaccaggac
cggactctggccccgtccctgctggctgcgctgcacaacaccacgcctgacctgcacgct
cagctgcgacaccaacggatcatcgtgaggaaagtgacagcagaagagagaacccagctg
gctgaccgcatcagccatgactggcaggagctgacggacgataccctgcagtggctgaca
ggctgcagccatatcatgtggctgatggctagcctgcgcctgcctgttgtggtgcataac
ggcatcatcgacatcatgctcatctaccaacagttcttcgggcccctgcctgccacgctg
ccggcgttcaagaaggcttttcactcagaacttccctgcgtttttgacacaaaactaatg
gcctaccaacttaagcgcatctataaggaggaagtacctgtttcagagtgtctgtcgaac
acgacgctggcgccgctgacggcagcgctgcaggagcagctgccggtgctgttcaagccc
aacctcagcatcacgcagccctacaacaagtacagcggcggagagcgaccacacgaagca
ggctacgacgcttacctgacggcggcctgctgcctgcacctggcgcacctgcacttcacc
tacgacctgcctcagcgtagtctgtgccgggcgatggacgcgcgagaacttctctgccaa
cttaagaactttgcaaacaaaattaacatctcaagagcggcagtgttctatgtgaacctg
acgggaaaagaccgcactgctccccgcccgccatggctcatcgttgagaacacaaatcgc
ttcttcagtttccgtggctcggaaaataacgttgacgttaacgacaacatcgcagctcgg
gaaattaaaactcactcgtcctctagcatgccggtatattttgacccgcaggttttacac
gccagagaaccacaaaccggtgtcagtaatgagcaaccccacccatctactcgcagcatc
tggaccattgataacaacgggttcgtgatcaagcagcctgacacatcttatctaagtcaa
cactgcaatacaaatgagaagcgaagtaataatttaactgctgactccaactcaaacgta
caaaaggaaccgaaactcccgttcgtctctgccaattctaaagacttttcaggcgggctc
gtctgccacgcacagaacgtaaaaccgctggagaaattcagtcctgagacagtttcgctt
ctgctgtcccggtttggttcggtggacgttcggtcgtggcgcaggaacaagctgctggtg
gctgtagcttcgtacgacacacacgaccaaatcctgacgtccttcagagcacccgggctg
agggtgtatccctacagcgccctcaagcactcagccctcgtcaggggcgtcttgtggact
ggactgttggcgtcggggggattgggcgccttcctgttgtacagcgccgttactgagagc
ggcacacgacgataa

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