Hyalella azteca: 108671289 Help Entry 108671289         CDS       T07535                                  Name (RefSeq) pre-mRNA-processing factor 19   KO K10599   pre-mRNA-processing factor 19 [EC:2.3.2.27] Organism hazt  Hyalella azteca Pathway hazt03040   Spliceosome hazt04120   Ubiquitin mediated proteolysis Brite KEGG Orthology (KO) [BR:hazt00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     108671289   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     108671289  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03041 Spliceosome [BR:hazt03041]     108671289    04121 Ubiquitin system [BR:hazt04121]     108671289    03400 DNA repair and recombination proteins [BR:hazt03400]     108671289 Enzymes [BR:hazt01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      108671289 Spliceosome [BR:hazt03041]  Complex B   Other components    Prp19 complex     108671289  Complex C    Prp19-CDC5 complex     108671289 Ubiquitin system [BR:hazt04121]  Ubiquitin ligases (E3)   U-box type E3    108671289 DNA repair and recombination proteins [BR:hazt03400]  Eukaryotic type   Other factors with a suspected DNA repair function    PSO4 complex     108671289 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  WD40_Prp19 WD40 WDR55 WD40_WDHD1_1st Prp19 Beta-prop_EML_2 WD40_CDC20-Fz WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_TEP1_2nd Beta-prop_EML ANAPC4_WD40 Beta-prop_IFT140_1st Beta-prop_WDR75_1st Beta-prop_TEP1_C WD40_MABP1-WDR62_1st Beta-prop_SCAP Beta-prop_WDR19_1st NBCH_WD40 Beta-prop_HPS5 Beta-prop_Vps41 WDR90_beta-prop_4th Beta-prop_RIG_2nd Beta-prop_IFT122_1st Beta-prop_DCAF4 Beta-prop_EIPR1 Beta-prop_SPT8 PEP5_VPS11_N eIF2A WD40_RFWD3 Beta-prop_WDR35_TULP_N RMC1_N U-box WD40_like ATG16 PUMA_CC Motif Other DBs NCBI-GeneID:  108671289 NCBI-ProteinID:  XP_018014283 UniProt:  A0A8B7NKU8 LinkDB All DBs Position Unknown AA seq 520 aa AA seqDB search MSLICAISNEVPEHAVVSPVSGGIFERRLIEKFISEHGIDPLNNKDLSIDQLIDIKVAPV VKPKPPSATSIPAILKALQDEWDSVMLHSFSLRQQLHTAKQELSHALYQHDAATRVIARL TKEVTAAREALATLKPQAGIQPQTPTHGVATGEAGGTADTPSHTPSHAAPAAPEAAPAPA TTGLSEAVVARLQSTATTLTQERKRRGRSVPEGLTPPEQIRAFSTLASHPGLHSASVPGI LSLDVHQKDTSKVVTGGADKNATVFNKDTEQVVAILKGHNKKVTCVVYHPTEDTVITASP DTQIRVWNVGTSQTLQLISAHDGPVTGLSLHATGDYLLSASLDHHWAFSDIRTGRVLCKV SDQSNSSALTAAQFHPDGLILGTGTQDATIKIWDLKERSNVANFPGHSGPISSIAFSENG YYLATAAEDSTVRLWDLRKLRNFKTLQLDEGYEVTDLCFDRSGTYLAVAGTDVRVYLCKQ WTELRVFTDHTALATGVRFSADAASLASTSMDRTLKIYGS NT seq 1563 nt NT seq  +upstreamnt  +downstreamnt atgtctctcatatgtgcaattagcaatgaagtgccagaacatgcagtcgtatcaccagtg tctggcggtatattcgagaggcgactcatcgagaagttcatctcggagcatgggattgac cccctcaacaacaaagatctctctatagaccaactcattgacatcaaggttgctccagtt gtgaagccaaagccaccaagtgccaccagcatacctgccatcttgaaagccttgcaggac gaatgggacagcgtcatgctgcactccttttccctccgccagcagctgcacactgccaaa caagaactaagtcacgcactgtaccagcacgatgcggcgacgcgagtcatcgctcgtctc acaaaggaagtgacggctgcaagagaggctcttgccaccctcaagcctcaggctggcatt cagccccagacacctacacatggcgtggcgacgggagaggctggaggcacggcagacacg ccttcacacacgccatcacacgccgcacctgctgctcctgaggctgctcctgctcctgcc actactggtctgagcgaggctgtggtagcacggctacagagcaccgccaccaccctcacg caggagcgcaagaggcgcggtcgctccgtgcctgaaggcctcactcctcctgaacaaatt cgcgccttctctactcttgcttctcatccgggtctgcacagcgccagtgtgcccggcatc ttgtccctggacgtgcaccagaaggacaccagcaaggtcgtcactggcggcgcggataag aatgccaccgtcttcaacaaggatactgaacaggtggtagccatcttgaagggccacaac aagaaggtgacgtgcgtcgtctaccatcccacggaggacactgtcatcaccgcgtcgcca gacacgcagattcgcgtatggaacgtgggcaccagccagacgctgcagctgatctctgct cacgacggccccgtgacaggcctctctctgcacgccacgggcgactacctcctctccgcg tcactggaccaccactgggccttctctgacatccgtacgggcagggtcctctgcaaggtg agcgaccagagcaacagctcggctctgacggccgctcagttccaccctgacggtcttatt ttaggcaccggaacccaggacgccaccatcaaaatctgggacttgaaggaaagaagcaac gtcgccaatttccctggccacagtggtccgatctcatcgattgcgttctccgagaacggc tactatctggccacggccgctgaggactcaactgtcaggctctgggatctgcgcaagttg cgcaacttcaaaaccctgcagttggatgaaggatacgaggttacagacctctgcttcgac cgctccggcacctaccttgccgtggcgggaactgatgtcagggtgtacctgtgcaagcag tggacggagctgcgcgtcttcacagaccacaccgcccttgccacgggcgtccgcttctcc gctgacgctgccagccttgcctccacttccatggaccgaacccttaagatctacggctca taa

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